RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 MYRIPQ8NFW9 859 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 PAXBP1Q9Y5B6 917 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 ZMYM4Q5VZL5 1548 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 GNAI2P04899 355 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 CREBRFQ8IUR6 639 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 ERCC4Q92889 916 aaPredicted RBP11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 NSD3Q9BZ95 1437 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 CYP46A1Q9Y6A2 500 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 ZNF500O60304 480 aaPredicted RBP11.33□□□□□ -0.59
NUDCD1-201ENST00000239690 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.59
NUDCD1-201ENST00000239690 IGSF3O75054 1194 aa11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 SPATA32Q96LK8 384 aa11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 SRCIN1Q9C0H9 1055 aa11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 DEF6Q9H4E7 631 aa11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 TMEM132EQ6IEE7 984 aa11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 ZSCAN31Q96LW9 406 aaPredicted RBP11.33□□□□□ -0.6
NUDCD1-201ENST00000239690 SURF6O75683 361 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 PLPPR3Q6T4P5 718 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 BMS1Q14692 1282 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 GAS2L3Q86XJ1 694 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 TSPYL4Q9UJ04 414 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 TNNQ9UQP3 1299 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 SPATA31E1Q6ZUB1 1445 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 CAMSAP2Q08AD1 1489 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 UGGT2Q9NYU1 1516 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 UBE2HP62256 183 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 NOL10Q9BSC4 688 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 HOOK1Q9UJC3 728 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 PTPRGP23470 1445 aa11.32□□□□□ -0.6
NUDCD1-201ENST00000239690 H0YHG0 523 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 NEMFO60524 1076 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 EIF3JO75822 258 aaKnown RBP11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 GTF2F1P35269 517 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 CEP57L1Q8IYX8 460 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 OGFRQ9NZT2 677 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 CLIP2Q9UDT6 1046 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 TEX14Q8IWB6 1497 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 FOSBP53539 338 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 CPLX2Q6PUV4 134 aaKnown RBP11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 SYNE3Q6ZMZ3 975 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 PDILTQ8N807 584 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 PPP6R1Q9UPN7 881 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 BLMP54132 1417 aaPredicted RBP11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 CAMK4Q16566 473 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 CLASRPQ8N2M8 674 aaKnown RBP11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 NECTIN2Q92692 538 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 TMX3Q96JJ7 454 aa11.31□□□□□ -0.6
NUDCD1-201ENST00000239690 CPLX1O14810 134 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 IPO7O95373 1038 aaKnown RBP11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 C9orf78Q9NZ63 289 aaPredicted RBP11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 AMPHP49418 695 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 ERLIN1O75477 346 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 FCHSD2O94868 740 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 CCT4P50991 539 aaKnown RBP11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 TTC22Q5TAA0 569 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 OLFM4Q6UX06 510 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
NUDCD1-201ENST00000239690 ZMYM3Q14202 1370 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 CEBPZQ03701 1054 aaKnown RBP11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 SCAND2PQ9GZW5 306 aaPredicted RBP11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 ERCC6Q03468 1493 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 POLR3GO15318 223 aaPredicted RBP11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 MX1P20591 662 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 PIK3C2GO75747 1445 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 FERMT3Q86UX7 667 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 TESK2Q96S53 571 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 RUFY1Q96T51 708 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 PDRG1Q9NUG6 133 aa11.29□□□□□ -0.6
NUDCD1-201ENST00000239690 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 SFPQP23246 707 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 RDXP35241 583 aaKnown RBP11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 CFAP45Q9UL16 551 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 ASXL1Q8IXJ9 1541 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 USP8P40818 1118 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 ANKRD20A12PQ8NF67 263 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 CUL7Q14999 1698 aa11.28□□□□□ -0.6
NUDCD1-201ENST00000239690 STX6O43752 255 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms