RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 SPATA31A7Q8IWB4 1347 aa14.28□□□□□ -0.12
CDCA3-201ENST00000229265 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
CDCA3-201ENST00000229265 NGEFQ8N5V2 710 aa14.28□□□□□ -0.12
CDCA3-201ENST00000229265 HAP1P54257 671 aaPredicted RBP14.27□□□□□ -0.13
CDCA3-201ENST00000229265 DEFB132Q7Z7B7 95 aa14.27□□□□□ -0.13
CDCA3-201ENST00000229265 AXIN2Q9Y2T1 843 aa14.27□□□□□ -0.13
CDCA3-201ENST00000229265 NFAT5O94916 1531 aa14.26□□□□□ -0.13
CDCA3-201ENST00000229265 LARP1Q6PKG0 1096 aaKnown RBP14.26□□□□□ -0.13
CDCA3-201ENST00000229265 ABTB2Q8N961 1025 aa14.26□□□□□ -0.13
CDCA3-201ENST00000229265 TNS1Q9HBL0 1735 aaKnown RBP14.25□□□□□ -0.13
CDCA3-201ENST00000229265 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
CDCA3-201ENST00000229265 PRDM11Q9NQV5 511 aa14.25□□□□□ -0.13
CDCA3-201ENST00000229265 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
CDCA3-201ENST00000229265 TTC21BQ7Z4L5 1316 aa14.24□□□□□ -0.13
CDCA3-201ENST00000229265 GCP02774 474 aa14.24□□□□□ -0.13
CDCA3-201ENST00000229265 STRN4Q9NRL3 753 aa14.24□□□□□ -0.13
CDCA3-201ENST00000229265 CCDC9Q9Y3X0 531 aaKnown RBP14.24□□□□□ -0.13
CDCA3-201ENST00000229265 ATAD2Q6PL18 1390 aa14.23□□□□□ -0.13
CDCA3-201ENST00000229265 FBLN1P23142 703 aa14.23□□□□□ -0.13
CDCA3-201ENST00000229265 COL5A2P05997 1499 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-201ENST00000229265 PPP2R1AP30153 589 aa14.22□□□□□ -0.13
CDCA3-201ENST00000229265 PTF1AQ7RTS3 328 aa14.22□□□□□ -0.13
CDCA3-201ENST00000229265 NME9Q86XW9 330 aa14.22□□□□□ -0.13
CDCA3-201ENST00000229265 SUPT16HQ9Y5B9 1047 aaKnown RBP14.22□□□□□ -0.13
CDCA3-201ENST00000229265 USP54Q70EL1 1684 aa14.22□□□□□ -0.13
CDCA3-201ENST00000229265 WNK3Q9BYP7 1800 aa14.22□□□□□ -0.13
CDCA3-201ENST00000229265 CPDO75976 1380 aa14.22□□□□□ -0.13
CDCA3-201ENST00000229265 SOX12O15370 315 aa14.21□□□□□ -0.13
CDCA3-201ENST00000229265 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
CDCA3-201ENST00000229265 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
CDCA3-201ENST00000229265 NSD2O96028 1365 aa14.21□□□□□ -0.14
CDCA3-201ENST00000229265 MYOM1P52179 1685 aa14.2□□□□□ -0.14
CDCA3-201ENST00000229265 USP35Q9P2H5 1018 aa14.2□□□□□ -0.14
CDCA3-201ENST00000229265 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
CDCA3-201ENST00000229265 A0A1W2PP64 1363 aa14.2□□□□□ -0.14
CDCA3-201ENST00000229265 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
CDCA3-201ENST00000229265 ZBTB7CA1YPR0 619 aa14.19□□□□□ -0.14
CDCA3-201ENST00000229265 NLRP6P59044 892 aa14.19□□□□□ -0.14
CDCA3-201ENST00000229265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDCA3-201ENST00000229265 CARD14Q9BXL6 1004 aa14.19□□□□□ -0.14
CDCA3-201ENST00000229265 LRRC37A3O60309 1634 aa14.19□□□□□ -0.14
CDCA3-201ENST00000229265 CGNL1Q0VF96 1302 aa14.18□□□□□ -0.14
CDCA3-201ENST00000229265 KRT27Q7Z3Y8 459 aa14.18□□□□□ -0.14
CDCA3-201ENST00000229265 TERF2IPQ9NYB0 399 aa14.18□□□□□ -0.14
CDCA3-201ENST00000229265 LTN1O94822 1766 aa14.18□□□□□ -0.14
CDCA3-201ENST00000229265 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
CDCA3-201ENST00000229265 NUDCQ9Y266 331 aa14.17□□□□□ -0.14
CDCA3-201ENST00000229265 ANKRD36BQ8N2N9 1353 aa14.17□□□□□ -0.14
CDCA3-201ENST00000229265 PARP4Q9UKK3 1724 aaKnown RBP14.16□□□□□ -0.14
CDCA3-201ENST00000229265 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
CDCA3-201ENST00000229265 BLMP54132 1417 aaPredicted RBP14.15□□□□□ -0.14
CDCA3-201ENST00000229265 SBF2Q86WG5 1849 aa14.15□□□□□ -0.14
CDCA3-201ENST00000229265 OVOS2A0A0J9YW53 1432 aa14.15□□□□□ -0.14
CDCA3-201ENST00000229265 OVOS2Q6IE36 1432 aa14.15□□□□□ -0.14
CDCA3-201ENST00000229265 AATKQ6ZMQ8 1374 aa14.14□□□□□ -0.15
CDCA3-201ENST00000229265 FKBP8Q14318 412 aa14.14□□□□□ -0.15
CDCA3-201ENST00000229265 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDCA3-201ENST00000229265 RNF123Q5XPI4 1314 aa14.14□□□□□ -0.15
CDCA3-201ENST00000229265 USP31Q70CQ4 1352 aa14.13□□□□□ -0.15
CDCA3-201ENST00000229265 A0A0G2JS52 829 aa14.13□□□□□ -0.15
CDCA3-201ENST00000229265 MYT1Q01538 1121 aa14.13□□□□□ -0.15
CDCA3-201ENST00000229265 DISP2A7MBM2 1401 aa14.13□□□□□ -0.15
CDCA3-201ENST00000229265 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
CDCA3-201ENST00000229265 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
CDCA3-201ENST00000229265 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
CDCA3-201ENST00000229265 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
CDCA3-201ENST00000229265 CRB1P82279 1406 aa14.1□□□□□ -0.15
CDCA3-201ENST00000229265 TRIM37O94972 964 aa14.1□□□□□ -0.15
CDCA3-201ENST00000229265 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
CDCA3-201ENST00000229265 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
CDCA3-201ENST00000229265 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
CDCA3-201ENST00000229265 ADAMTS8Q9UP79 889 aa14.1□□□□□ -0.15
CDCA3-201ENST00000229265 RREB1Q92766 1687 aa14.1□□□□□ -0.15
CDCA3-201ENST00000229265 NUP188Q5SRE5 1749 aa14.1□□□□□ -0.15
CDCA3-201ENST00000229265 EDC4Q6P2E9 1401 aaKnown RBP14.09□□□□□ -0.15
CDCA3-201ENST00000229265 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
CDCA3-201ENST00000229265 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
CDCA3-201ENST00000229265 FAM208AQ9UK61 1670 aaKnown RBP14.09□□□□□ -0.15
CDCA3-201ENST00000229265 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
CDCA3-201ENST00000229265 SHANK3Q9BYB0 1731 aa14.08□□□□□ -0.16
CDCA3-201ENST00000229265 PSDA5PKW4 1024 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-201ENST00000229265 EVA1CP58658 441 aa14.08□□□□□ -0.16
CDCA3-201ENST00000229265 EZH2Q15910 746 aaKnown RBP14.08□□□□□ -0.16
CDCA3-201ENST00000229265 MARCH10Q8NA82 808 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-201ENST00000229265 WDR17Q8IZU2 1322 aa14.07□□□□□ -0.16
CDCA3-201ENST00000229265 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
CDCA3-201ENST00000229265 CAMKK2Q96RR4 588 aa14.06□□□□□ -0.16
CDCA3-201ENST00000229265 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
CDCA3-201ENST00000229265 PPP4R2Q9NY27 417 aa14.06□□□□□ -0.16
CDCA3-201ENST00000229265 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
CDCA3-201ENST00000229265 FYB1O15117 783 aa14.04□□□□□ -0.16
CDCA3-201ENST00000229265 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
CDCA3-201ENST00000229265 MAP3K19Q56UN5 1328 aa14.04□□□□□ -0.16
CDCA3-201ENST00000229265 RRS1Q15050 365 aaKnown RBP14.03□□□□□ -0.16
CDCA3-201ENST00000229265 TOM1L2Q6ZVM7 507 aa14.03□□□□□ -0.16
CDCA3-201ENST00000229265 ERBB3P21860 1342 aa14.03□□□□□ -0.16
CDCA3-201ENST00000229265 KCNQ2O43526 872 aa14.02□□□□□ -0.17
CDCA3-201ENST00000229265 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
CDCA3-201ENST00000229265 CCDC125Q86Z20 511 aa14.02□□□□□ -0.17
CDCA3-201ENST00000229265 PROM2Q8N271 834 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms