RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 LTKP29376 864 aa22.05■■□□□ 1.12
CDKN1B-201ENST00000228872 TERF1P54274 439 aa22.04■■□□□ 1.12
CDKN1B-201ENST00000228872 MORC1Q86VD1 984 aa22.04■■□□□ 1.12
CDKN1B-201ENST00000228872 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 EID1Q9Y6B2 187 aa22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 NSD3Q9BZ95 1437 aa22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 SLC12A5Q9H2X9 1139 aa22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 MSNP26038 577 aaKnown RBP22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 TNNT2P45379 298 aaPredicted RBP22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 TXNDC2Q86VQ3 553 aa22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 ANP32BQ92688 251 aaKnown RBP22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 DDX19BQ9UMR2 479 aa22.03■■□□□ 1.12
CDKN1B-201ENST00000228872 TRIM27P14373 513 aa22.02■■□□□ 1.12
CDKN1B-201ENST00000228872 SIRT1Q96EB6 747 aa22.02■■□□□ 1.12
CDKN1B-201ENST00000228872 KIF2CQ99661 725 aa22.02■■□□□ 1.12
CDKN1B-201ENST00000228872 IBTKQ9P2D0 1353 aaPredicted RBP22.02■■□□□ 1.12
CDKN1B-201ENST00000228872 FAM135BQ49AJ0 1406 aa22.02■■□□□ 1.12
CDKN1B-201ENST00000228872 USP32Q8NFA0 1604 aa22.02■■□□□ 1.11
CDKN1B-201ENST00000228872 ITPRIPQ8IWB1 547 aa22.02■■□□□ 1.11
CDKN1B-201ENST00000228872 FOXD4L1Q9NU39 408 aa22.02■■□□□ 1.11
CDKN1B-201ENST00000228872 SMC4Q9NTJ3 1288 aa22.01■■□□□ 1.11
CDKN1B-201ENST00000228872 CD2BP2O95400 341 aaKnown RBP22■■□□□ 1.11
CDKN1B-201ENST00000228872 CT47B1P0C2W7 299 aaPredicted RBP22■■□□□ 1.11
CDKN1B-201ENST00000228872 SSFA2P28290 1259 aa22■■□□□ 1.11
CDKN1B-201ENST00000228872 RBM10P98175 930 aaKnown RBP22■■□□□ 1.11
CDKN1B-201ENST00000228872 KLHL40Q2TBA0 621 aa21.99■■□□□ 1.11
CDKN1B-201ENST00000228872 NCBP3Q53F19 620 aaKnown RBP21.99■■□□□ 1.11
CDKN1B-201ENST00000228872 NUCB1Q02818 461 aa21.99■■□□□ 1.11
CDKN1B-201ENST00000228872 SAFB2Q14151 953 aaKnown RBP eCLIP21.99■■□□□ 1.11
CDKN1B-201ENST00000228872 GOLGA6L22H0YM25 854 aa21.98■■□□□ 1.11
CDKN1B-201ENST00000228872 K7ELQ4 463 aaPredicted RBP21.98■■□□□ 1.11
CDKN1B-201ENST00000228872 CLEC17AQ6ZS10 378 aa21.98■■□□□ 1.11
CDKN1B-201ENST00000228872 PRDM4Q9UKN5 801 aa21.97■■□□□ 1.11
CDKN1B-201ENST00000228872 TSR2Q969E8 191 aaKnown RBP21.97■■□□□ 1.11
CDKN1B-201ENST00000228872 DDX49Q9Y6V7 483 aaKnown RBP21.97■■□□□ 1.11
CDKN1B-201ENST00000228872 ATAD2Q6PL18 1390 aa21.97■■□□□ 1.11
CDKN1B-201ENST00000228872 MINK1Q8N4C8 1332 aaPredicted RBP21.96■■□□□ 1.11
CDKN1B-201ENST00000228872 ATF7IPQ6VMQ6 1270 aa21.96■■□□□ 1.11
CDKN1B-201ENST00000228872 MAP7D2Q96T17 732 aa21.96■■□□□ 1.11
CDKN1B-201ENST00000228872 LNPKQ9C0E8 428 aa21.96■■□□□ 1.11
CDKN1B-201ENST00000228872 ZBTB40Q9NUA8 1239 aa21.95■■□□□ 1.1
CDKN1B-201ENST00000228872 R3HCC1Q9Y3T6 440 aaKnown RBP21.95■■□□□ 1.1
CDKN1B-201ENST00000228872 MTHFSP49914 203 aa21.95■■□□□ 1.1
CDKN1B-201ENST00000228872 HS1BP3Q53T59 392 aa21.95■■□□□ 1.1
CDKN1B-201ENST00000228872 SSH1Q8WYL5 1049 aa21.95■■□□□ 1.1
CDKN1B-201ENST00000228872 BAG4O95429 457 aaKnown RBP21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 CABP2Q9NPB3 220 aa21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 ANKRD36BQ8N2N9 1353 aa21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 ZNF445P59923 1031 aa21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 BMP2KLQ5H9B9 411 aa21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 CFAP53Q96M91 514 aa21.94■■□□□ 1.1
CDKN1B-201ENST00000228872 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
CDKN1B-201ENST00000228872 TMEM57Q8N5G2 664 aa21.93■■□□□ 1.1
CDKN1B-201ENST00000228872 CHD1LQ86WJ1 897 aa21.93■■□□□ 1.1
CDKN1B-201ENST00000228872 FAM13BQ9NYF5 915 aa21.93■■□□□ 1.1
CDKN1B-201ENST00000228872 TBX22Q9Y458 520 aa21.93■■□□□ 1.1
CDKN1B-201ENST00000228872 NOB1Q9ULX3 412 aaKnown RBP21.93■■□□□ 1.1
CDKN1B-201ENST00000228872 ADGRB2O60241 1585 aa21.92■■□□□ 1.1
CDKN1B-201ENST00000228872 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
CDKN1B-201ENST00000228872 ZNF500O60304 480 aaPredicted RBP21.92■■□□□ 1.1
CDKN1B-201ENST00000228872 RBM42Q9BTD8 480 aaKnown RBP21.92■■□□□ 1.1
CDKN1B-201ENST00000228872 NOL7Q9UMY1 257 aaKnown RBP21.92■■□□□ 1.1
CDKN1B-201ENST00000228872 PTPRUQ92729 1446 aa21.91■■□□□ 1.1
CDKN1B-201ENST00000228872 CDK19Q9BWU1 502 aa21.91■■□□□ 1.1
CDKN1B-201ENST00000228872 XRN1Q8IZH2 1706 aaKnown RBP21.9■■□□□ 1.1
CDKN1B-201ENST00000228872 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.9■■□□□ 1.1
CDKN1B-201ENST00000228872 U2AF1L5P0DN76 240 aaPredicted RBP21.89■■□□□ 1.1
CDKN1B-201ENST00000228872 U2AF1Q01081 240 aaKnown RBP eCLIP21.89■■□□□ 1.1
CDKN1B-201ENST00000228872 ROBO2Q9HCK4 1378 aa21.89■■□□□ 1.09
CDKN1B-201ENST00000228872 PDLIM2Q96JY6 352 aa21.89■■□□□ 1.09
CDKN1B-201ENST00000228872 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.88■■□□□ 1.09
CDKN1B-201ENST00000228872 CD163L1Q9NR16 1453 aa21.87■■□□□ 1.09
CDKN1B-201ENST00000228872 PTCH1Q13635 1447 aa21.87■■□□□ 1.09
CDKN1B-201ENST00000228872 UQCRHLA0A096LP55 91 aa21.87■■□□□ 1.09
CDKN1B-201ENST00000228872 UQCRHP07919 91 aa21.87■■□□□ 1.09
CDKN1B-201ENST00000228872 SLC26A8Q96RN1 970 aa21.87■■□□□ 1.09
CDKN1B-201ENST00000228872 ZSCAN23Q3MJ62 389 aa21.87■■□□□ 1.09
CDKN1B-201ENST00000228872 TBC1D9Q6ZT07 1266 aa21.87■■□□□ 1.09
CDKN1B-201ENST00000228872 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
CDKN1B-201ENST00000228872 XPCQ01831 940 aaPredicted RBP21.86■■□□□ 1.09
CDKN1B-201ENST00000228872 RBSNQ9H1K0 784 aa21.86■■□□□ 1.09
CDKN1B-201ENST00000228872 CAVIN1Q6NZI2 390 aaKnown RBP21.86■■□□□ 1.09
CDKN1B-201ENST00000228872 KIF16BQ96L93 1317 aa21.85■■□□□ 1.09
CDKN1B-201ENST00000228872 A0A1W2PP64 1363 aa21.85■■□□□ 1.09
CDKN1B-201ENST00000228872 MCTP1Q6DN14 999 aa21.85■■□□□ 1.09
CDKN1B-201ENST00000228872 WASLO00401 505 aaPredicted RBP21.84■■□□□ 1.09
CDKN1B-201ENST00000228872 ANKRD26Q9UPS8 1709 aa21.84■■□□□ 1.09
CDKN1B-201ENST00000228872 NSD2O96028 1365 aa21.84■■□□□ 1.09
CDKN1B-201ENST00000228872 ATP7BP35670 1465 aa21.84■■□□□ 1.09
CDKN1B-201ENST00000228872 ANKLE2Q86XL3 938 aa21.84■■□□□ 1.09
CDKN1B-201ENST00000228872 NCLP19338 710 aaKnown RBP21.83■■□□□ 1.09
CDKN1B-201ENST00000228872 LMBRD1Q9NUN5 540 aa21.83■■□□□ 1.09
CDKN1B-201ENST00000228872 CHD2O14647 1828 aaKnown RBP21.83■■□□□ 1.09
CDKN1B-201ENST00000228872 IPO8O15397 1037 aaKnown RBP21.83■■□□□ 1.08
CDKN1B-201ENST00000228872 ZKSCAN5Q9Y2L8 839 aa21.83■■□□□ 1.08
CDKN1B-201ENST00000228872 ANKRD45Q5TZF3 282 aa21.82■■□□□ 1.08
CDKN1B-201ENST00000228872 TERF2IPQ9NYB0 399 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms