RNA–Protein interactions for RNA: ENST00000228682.6

GLI1-201, Transcript of GLI family zinc finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI1, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-201ENST00000228682 ARHGEF25Q86VW2 580 aa10.79□□□□□ -0.68
GLI1-201ENST00000228682 RIPK4P57078 832 aa10.78□□□□□ -0.68
GLI1-201ENST00000228682 NBPF6Q5VWK0 638 aa10.78□□□□□ -0.68
GLI1-201ENST00000228682 NBPF4Q96M43 638 aa10.78□□□□□ -0.68
GLI1-201ENST00000228682 NWD1Q149M9 1564 aa10.78□□□□□ -0.68
GLI1-201ENST00000228682 IP6K1Q92551 441 aa10.78□□□□□ -0.68
GLI1-201ENST00000228682 TNS3Q68CZ2 1445 aa10.78□□□□□ -0.68
GLI1-201ENST00000228682 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.68
GLI1-201ENST00000228682 PHACTR3Q96KR7 559 aa10.77□□□□□ -0.68
GLI1-201ENST00000228682 MYOM1P52179 1685 aa10.77□□□□□ -0.69
GLI1-201ENST00000228682 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
GLI1-201ENST00000228682 SYTL4Q96C24 671 aaPredicted RBP10.77□□□□□ -0.69
GLI1-201ENST00000228682 FLT4P35916 1363 aa10.77□□□□□ -0.69
GLI1-201ENST00000228682 USP32Q8NFA0 1604 aa10.77□□□□□ -0.69
GLI1-201ENST00000228682 ELL2O00472 640 aaPredicted RBP10.76□□□□□ -0.69
GLI1-201ENST00000228682 RUNDC1Q96C34 613 aa10.76□□□□□ -0.69
GLI1-201ENST00000228682 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
GLI1-201ENST00000228682 KAT6BQ8WYB5 2073 aa10.76□□□□□ -0.69
GLI1-201ENST00000228682 IL13P35225 146 aa10.76□□□□□ -0.69
GLI1-201ENST00000228682 CDCA7LQ96GN5 454 aa10.76□□□□□ -0.69
GLI1-201ENST00000228682 PHF23Q9BUL5 403 aaPredicted RBP10.76□□□□□ -0.69
GLI1-201ENST00000228682 FMN2Q9NZ56 1722 aa10.76□□□□□ -0.69
GLI1-201ENST00000228682 LTBP4Q8N2S1 1624 aa10.75□□□□□ -0.69
GLI1-201ENST00000228682 SMG6Q86US8 1419 aaKnown RBP10.75□□□□□ -0.69
GLI1-201ENST00000228682 PNNQ9H307 717 aaKnown RBP10.75□□□□□ -0.69
GLI1-201ENST00000228682 ADGRB2O60241 1585 aa10.75□□□□□ -0.69
GLI1-201ENST00000228682 MCM10Q7L590 875 aa10.75□□□□□ -0.69
GLI1-201ENST00000228682 SBNO1A3KN83 1393 aa10.74□□□□□ -0.69
GLI1-201ENST00000228682 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
GLI1-201ENST00000228682 MIS18AQ9NYP9 233 aa10.74□□□□□ -0.69
GLI1-201ENST00000228682 ZNF530Q6P9A1 599 aaPredicted RBP10.73□□□□□ -0.69
GLI1-201ENST00000228682 OVOS2A0A0J9YW53 1432 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 OVOS2Q6IE36 1432 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
GLI1-201ENST00000228682 C1orf141Q5JVX7 400 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 ANP32EQ9BTT0 268 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 ITSN1Q15811 1721 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 FCHSD2O94868 740 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 FAM182BQ5T319 152 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 MPRIPQ6WCQ1 1025 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 USP21Q9UK80 565 aa10.73□□□□□ -0.69
GLI1-201ENST00000228682 TCERG1O14776 1098 aaKnown RBP10.72□□□□□ -0.69
GLI1-201ENST00000228682 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
GLI1-201ENST00000228682 FAM98CQ17RN3 349 aaKnown RBP10.72□□□□□ -0.69
GLI1-201ENST00000228682 TMPOP42166 694 aaKnown RBP10.71□□□□□ -0.69
GLI1-201ENST00000228682 USP31Q70CQ4 1352 aa10.71□□□□□ -0.69
GLI1-201ENST00000228682 ERBB3P21860 1342 aa10.71□□□□□ -0.7
GLI1-201ENST00000228682 MTHFSDQ2M296 383 aaKnown RBP10.71□□□□□ -0.7
GLI1-201ENST00000228682 NECTIN2Q92692 538 aa10.71□□□□□ -0.7
GLI1-201ENST00000228682 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.7
GLI1-201ENST00000228682 ARXQ96QS3 562 aa10.71□□□□□ -0.7
GLI1-201ENST00000228682 PNPLA6Q8IY17 1366 aa10.7□□□□□ -0.7
GLI1-201ENST00000228682 ROBO1Q9Y6N7 1651 aa10.7□□□□□ -0.7
GLI1-201ENST00000228682 RSPH6AQ9H0K4 717 aa10.7□□□□□ -0.7
GLI1-201ENST00000228682 AATKQ6ZMQ8 1374 aa10.7□□□□□ -0.7
GLI1-201ENST00000228682 JCADQ9P266 1359 aa10.7□□□□□ -0.7
GLI1-201ENST00000228682 PLEKHO1Q53GL0 409 aaPredicted RBP10.7□□□□□ -0.7
GLI1-201ENST00000228682 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
GLI1-201ENST00000228682 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
GLI1-201ENST00000228682 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
GLI1-201ENST00000228682 TEFQ10587 303 aa10.69□□□□□ -0.7
GLI1-201ENST00000228682 USP19O94966 1318 aa10.69□□□□□ -0.7
GLI1-201ENST00000228682 PXDNQ92626 1479 aa10.69□□□□□ -0.7
GLI1-201ENST00000228682 INSRP06213 1382 aa10.69□□□□□ -0.7
GLI1-201ENST00000228682 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
GLI1-201ENST00000228682 ACSBG1Q96GR2 724 aa10.68□□□□□ -0.7
GLI1-201ENST00000228682 XIRP1Q702N8 1843 aaKnown RBP10.68□□□□□ -0.7
GLI1-201ENST00000228682 NFE2L2Q16236 605 aa10.67□□□□□ -0.7
GLI1-201ENST00000228682 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
GLI1-201ENST00000228682 SUPT16HQ9Y5B9 1047 aaKnown RBP10.67□□□□□ -0.7
GLI1-201ENST00000228682 AFF2P51816 1311 aa10.67□□□□□ -0.7
GLI1-201ENST00000228682 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
GLI1-201ENST00000228682 EXOC5O00471 708 aa10.67□□□□□ -0.7
GLI1-201ENST00000228682 IL2RBP14784 551 aa10.67□□□□□ -0.7
GLI1-201ENST00000228682 PDE3BQ13370 1112 aa10.67□□□□□ -0.7
GLI1-201ENST00000228682 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
GLI1-201ENST00000228682 QTRT2Q9H974 415 aaKnown RBP10.67□□□□□ -0.7
GLI1-201ENST00000228682 NEFLP07196 543 aa10.66□□□□□ -0.7
GLI1-201ENST00000228682 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
GLI1-201ENST00000228682 WDR17Q8IZU2 1322 aa10.66□□□□□ -0.7
GLI1-201ENST00000228682 SPG7Q9UQ90 795 aa10.66□□□□□ -0.7
GLI1-201ENST00000228682 MAP2P11137 1827 aaKnown RBP10.66□□□□□ -0.7
GLI1-201ENST00000228682 ZCRB1Q8TBF4 217 aaKnown RBP10.66□□□□□ -0.7
GLI1-201ENST00000228682 LGR6Q9HBX8 967 aa10.66□□□□□ -0.7
GLI1-201ENST00000228682 PIK3C2AO00443 1686 aa10.66□□□□□ -0.7
GLI1-201ENST00000228682 GNAT3A8MTJ3 354 aa10.65□□□□□ -0.7
GLI1-201ENST00000228682 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
GLI1-201ENST00000228682 DDB1Q16531 1140 aa10.65□□□□□ -0.7
GLI1-201ENST00000228682 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
GLI1-201ENST00000228682 ZBED9Q6R2W3 1325 aa10.65□□□□□ -0.7
GLI1-201ENST00000228682 UNC5CLQ8IV45 518 aa10.65□□□□□ -0.71
GLI1-201ENST00000228682 FBXO41Q8TF61 875 aa10.65□□□□□ -0.71
GLI1-201ENST00000228682 EIF2S2P20042 333 aaKnown RBP10.64□□□□□ -0.71
GLI1-201ENST00000228682 IGSF1Q8N6C5 1336 aa10.64□□□□□ -0.71
GLI1-201ENST00000228682 PTCD1O75127 700 aaKnown RBP10.64□□□□□ -0.71
GLI1-201ENST00000228682 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
GLI1-201ENST00000228682 TOPAZ1Q8N9V7 1692 aa10.64□□□□□ -0.71
GLI1-201ENST00000228682 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
GLI1-201ENST00000228682 SLC39A6Q13433 755 aa10.64□□□□□ -0.71
GLI1-201ENST00000228682 NGEFQ8N5V2 710 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms