RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 USP35Q9P2H5 1018 aa10.54□□□□□ -0.72
CCL13-201ENST00000225844 TULP4Q9NRJ4 1543 aa10.53□□□□□ -0.72
CCL13-201ENST00000225844 PARD3Q8TEW0 1356 aa10.53□□□□□ -0.72
CCL13-201ENST00000225844 RGPD1P0DJD0 1748 aa10.53□□□□□ -0.72
CCL13-201ENST00000225844 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
CCL13-201ENST00000225844 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
CCL13-201ENST00000225844 CHRNA2Q15822 529 aa10.52□□□□□ -0.73
CCL13-201ENST00000225844 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
CCL13-201ENST00000225844 TERF2IPQ9NYB0 399 aa10.52□□□□□ -0.73
CCL13-201ENST00000225844 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
CCL13-201ENST00000225844 KCNQ2O43526 872 aa10.51□□□□□ -0.73
CCL13-201ENST00000225844 EVA1CP58658 441 aa10.51□□□□□ -0.73
CCL13-201ENST00000225844 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
CCL13-201ENST00000225844 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
CCL13-201ENST00000225844 UTRNP46939 3433 aa10.51□□□□□ -0.73
CCL13-201ENST00000225844 NRAPQ86VF7 1730 aa10.5□□□□□ -0.73
CCL13-201ENST00000225844 ABCA3Q99758 1704 aa10.5□□□□□ -0.73
CCL13-201ENST00000225844 COL14A1Q05707 1796 aaKnown RBP10.5□□□□□ -0.73
CCL13-201ENST00000225844 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCL13-201ENST00000225844 ZC3H6P61129 1189 aaKnown RBP10.5□□□□□ -0.73
CCL13-201ENST00000225844 POLR3AO14802 1390 aaPredicted RBP10.5□□□□□ -0.73
CCL13-201ENST00000225844 KIAA0232Q92628 1395 aa10.5□□□□□ -0.73
CCL13-201ENST00000225844 ZNF316A6NFI3 1004 aaPredicted RBP10.49□□□□□ -0.73
CCL13-201ENST00000225844 HDGFL2Q7Z4V5 671 aaPredicted RBP10.49□□□□□ -0.73
CCL13-201ENST00000225844 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
CCL13-201ENST00000225844 ATP7BP35670 1465 aa10.49□□□□□ -0.73
CCL13-201ENST00000225844 THSD7AQ9UPZ6 1657 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 TNS1Q9HBL0 1735 aaKnown RBP10.48□□□□□ -0.73
CCL13-201ENST00000225844 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 NUTM2GQ5VZR2 741 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 PRR36Q9H6K5 1346 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 CCDC7Q96M83 1385 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 PPIP5K1Q6PFW1 1433 aa10.48□□□□□ -0.73
CCL13-201ENST00000225844 ZNF784Q8NCA9 323 aaPredicted RBP10.47□□□□□ -0.73
CCL13-201ENST00000225844 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
CCL13-201ENST00000225844 TCP11L2Q8N4U5 519 aa10.46□□□□□ -0.73
CCL13-201ENST00000225844 TMC1Q8TDI8 760 aa10.46□□□□□ -0.73
CCL13-201ENST00000225844 ACEP12821 1306 aa10.46□□□□□ -0.73
CCL13-201ENST00000225844 ANKRD36BQ8N2N9 1353 aa10.46□□□□□ -0.74
CCL13-201ENST00000225844 CPSF1Q10570 1443 aaKnown RBP10.46□□□□□ -0.74
CCL13-201ENST00000225844 RGPD8O14715 1765 aaPredicted RBP10.45□□□□□ -0.74
CCL13-201ENST00000225844 ITSN1Q15811 1721 aa10.45□□□□□ -0.74
CCL13-201ENST00000225844 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
CCL13-201ENST00000225844 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
CCL13-201ENST00000225844 CHADLQ6NUI6 762 aa10.45□□□□□ -0.74
CCL13-201ENST00000225844 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
CCL13-201ENST00000225844 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
CCL13-201ENST00000225844 SLC12A5Q9H2X9 1139 aa10.45□□□□□ -0.74
CCL13-201ENST00000225844 ZBTB7AO95365 584 aa10.44□□□□□ -0.74
CCL13-201ENST00000225844 SSH2Q76I76 1423 aa10.43□□□□□ -0.74
CCL13-201ENST00000225844 KTN1Q86UP2 1357 aaKnown RBP10.43□□□□□ -0.74
CCL13-201ENST00000225844 ZBTB7CA1YPR0 619 aa10.43□□□□□ -0.74
CCL13-201ENST00000225844 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
CCL13-201ENST00000225844 TRPM3Q9HCF6 1732 aaPredicted RBP10.43□□□□□ -0.74
CCL13-201ENST00000225844 EDC4Q6P2E9 1401 aaKnown RBP10.42□□□□□ -0.74
CCL13-201ENST00000225844 TOPAZ1Q8N9V7 1692 aa10.42□□□□□ -0.74
CCL13-201ENST00000225844 ALS2Q96Q42 1657 aa10.42□□□□□ -0.74
CCL13-201ENST00000225844 PANK3Q9H999 370 aa10.42□□□□□ -0.74
CCL13-201ENST00000225844 ANO8Q9HCE9 1232 aaPredicted RBP10.42□□□□□ -0.74
CCL13-201ENST00000225844 USP6P35125 1406 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 NUP188Q5SRE5 1749 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 NPC1L1Q9UHC9 1359 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 CGNL1Q0VF96 1302 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 C1QTNF8P60827 252 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 POTEHQ6S545 545 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 POLR3GLQ9BT43 218 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 THRAP3Q9Y2W1 955 aaKnown RBP10.41□□□□□ -0.74
CCL13-201ENST00000225844 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 RREB1Q92766 1687 aa10.41□□□□□ -0.74
CCL13-201ENST00000225844 A0A1W2PP64 1363 aa10.4□□□□□ -0.74
CCL13-201ENST00000225844 NSD2O96028 1365 aa10.4□□□□□ -0.74
CCL13-201ENST00000225844 TTC21BQ7Z4L5 1316 aa10.4□□□□□ -0.74
CCL13-201ENST00000225844 PER1O15534 1290 aaPredicted RBP10.4□□□□□ -0.74
CCL13-201ENST00000225844 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
CCL13-201ENST00000225844 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
CCL13-201ENST00000225844 NLRP13Q86W25 1043 aa10.4□□□□□ -0.74
CCL13-201ENST00000225844 ABTB2Q8N961 1025 aa10.4□□□□□ -0.74
CCL13-201ENST00000225844 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
CCL13-201ENST00000225844 CD163L1Q9NR16 1453 aa10.4□□□□□ -0.74
CCL13-201ENST00000225844 CAMTA1Q9Y6Y1 1673 aa10.39□□□□□ -0.75
CCL13-201ENST00000225844 PLSCR1O15162 318 aa10.39□□□□□ -0.75
CCL13-201ENST00000225844 FHDC1Q9C0D6 1143 aaPredicted RBP10.39□□□□□ -0.75
CCL13-201ENST00000225844 STK32BQ9NY57 414 aa10.39□□□□□ -0.75
CCL13-201ENST00000225844 OVOS2A0A0G2JMS6 1433 aa10.39□□□□□ -0.75
CCL13-201ENST00000225844 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
CCL13-201ENST00000225844 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
CCL13-201ENST00000225844 USP31Q70CQ4 1352 aa10.39□□□□□ -0.75
CCL13-201ENST00000225844 PTGER2P43116 358 aa10.38□□□□□ -0.75
CCL13-201ENST00000225844 DDB1Q16531 1140 aa10.38□□□□□ -0.75
CCL13-201ENST00000225844 KCNH5Q8NCM2 988 aa10.38□□□□□ -0.75
CCL13-201ENST00000225844 NRKQ7Z2Y5 1582 aa10.38□□□□□ -0.75
CCL13-201ENST00000225844 SYT17Q9BSW7 474 aa10.37□□□□□ -0.75
CCL13-201ENST00000225844 CARD14Q9BXL6 1004 aa10.37□□□□□ -0.75
CCL13-201ENST00000225844 FYB1O15117 783 aa10.36□□□□□ -0.75
CCL13-201ENST00000225844 GCP02774 474 aa10.36□□□□□ -0.75
CCL13-201ENST00000225844 TOM1L2Q6ZVM7 507 aa10.36□□□□□ -0.75
CCL13-201ENST00000225844 PTF1AQ7RTS3 328 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms