RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 FUT2Q10981 343 aa11.08□□□□□ -0.64
CCL1-201ENST00000225842 SYMPKQ92797 1274 aaKnown RBP11.08□□□□□ -0.64
CCL1-201ENST00000225842 TRAPPC8Q9Y2L5 1435 aa11.08□□□□□ -0.64
CCL1-201ENST00000225842 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
CCL1-201ENST00000225842 MFAP1P55081 439 aaKnown RBP11.07□□□□□ -0.64
CCL1-201ENST00000225842 ALG2Q9H553 416 aa11.07□□□□□ -0.64
CCL1-201ENST00000225842 LMOD1P29536 600 aaPredicted RBP11.06□□□□□ -0.64
CCL1-201ENST00000225842 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
CCL1-201ENST00000225842 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
CCL1-201ENST00000225842 MTMR7Q9Y216 660 aa11.06□□□□□ -0.64
CCL1-201ENST00000225842 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
CCL1-201ENST00000225842 HECW1Q76N89 1606 aa11.06□□□□□ -0.64
CCL1-201ENST00000225842 CFHP08603 1231 aa11.05□□□□□ -0.64
CCL1-201ENST00000225842 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
CCL1-201ENST00000225842 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
CCL1-201ENST00000225842 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
CCL1-201ENST00000225842 USTQ9Y2C2 406 aa11.05□□□□□ -0.64
CCL1-201ENST00000225842 NR6A1Q15406 480 aa11.04□□□□□ -0.64
CCL1-201ENST00000225842 CDCA8Q53HL2 280 aa11.04□□□□□ -0.64
CCL1-201ENST00000225842 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
CCL1-201ENST00000225842 UCN2Q96RP3 112 aa11.04□□□□□ -0.64
CCL1-201ENST00000225842 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
CCL1-201ENST00000225842 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
CCL1-201ENST00000225842 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
CCL1-201ENST00000225842 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
CCL1-201ENST00000225842 SNPHO15079 494 aa11.02□□□□□ -0.65
CCL1-201ENST00000225842 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
CCL1-201ENST00000225842 RNF40O75150 1001 aa11.02□□□□□ -0.65
CCL1-201ENST00000225842 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
CCL1-201ENST00000225842 RGS17Q9UGC6 210 aaPredicted RBP11.02□□□□□ -0.65
CCL1-201ENST00000225842 CFAP74Q9C0B2 1584 aa11.02□□□□□ -0.65
CCL1-201ENST00000225842 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.65
CCL1-201ENST00000225842 BRD1O95696 1058 aa11.01□□□□□ -0.65
CCL1-201ENST00000225842 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
CCL1-201ENST00000225842 SEMA3FQ13275 785 aa11.01□□□□□ -0.65
CCL1-201ENST00000225842 SAMD7Q7Z3H4 446 aa11.01□□□□□ -0.65
CCL1-201ENST00000225842 SETD1BQ9UPS6 1966 aaKnown RBP11.01□□□□□ -0.65
CCL1-201ENST00000225842 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
CCL1-201ENST00000225842 KCNA1Q09470 495 aa11□□□□□ -0.65
CCL1-201ENST00000225842 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
CCL1-201ENST00000225842 FOXD4L5Q5VV16 416 aaPredicted RBP11□□□□□ -0.65
CCL1-201ENST00000225842 FOXD4L4Q8WXT5 416 aaPredicted RBP11□□□□□ -0.65
CCL1-201ENST00000225842 SOX11P35716 441 aa10.98□□□□□ -0.65
CCL1-201ENST00000225842 DMRTA1Q5VZB9 504 aa10.98□□□□□ -0.65
CCL1-201ENST00000225842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCL1-201ENST00000225842 ARHGAP33O14559 1287 aa10.97□□□□□ -0.65
CCL1-201ENST00000225842 EFCAB2Q5VUJ9 269 aa10.97□□□□□ -0.65
CCL1-201ENST00000225842 TBC1D9Q6ZT07 1266 aa10.97□□□□□ -0.65
CCL1-201ENST00000225842 AFAP1Q8N556 730 aa10.97□□□□□ -0.65
CCL1-201ENST00000225842 AXIN2Q9Y2T1 843 aa10.97□□□□□ -0.65
CCL1-201ENST00000225842 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
CCL1-201ENST00000225842 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
CCL1-201ENST00000225842 PNMA1Q8ND90 353 aa10.96□□□□□ -0.65
CCL1-201ENST00000225842 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
CCL1-201ENST00000225842 PLCH2O75038 1416 aa10.95□□□□□ -0.66
CCL1-201ENST00000225842 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
CCL1-201ENST00000225842 CNTLNQ9NXG0 1405 aa10.95□□□□□ -0.66
CCL1-201ENST00000225842 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
CCL1-201ENST00000225842 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
CCL1-201ENST00000225842 CTTNBP2Q8WZ74 1663 aa10.95□□□□□ -0.66
CCL1-201ENST00000225842 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
CCL1-201ENST00000225842 NPATQ14207 1427 aa10.94□□□□□ -0.66
CCL1-201ENST00000225842 KMT5BQ4FZB7 885 aa10.94□□□□□ -0.66
CCL1-201ENST00000225842 POTEAQ6S8J7 498 aa10.94□□□□□ -0.66
CCL1-201ENST00000225842 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
CCL1-201ENST00000225842 C3P01024 1663 aa10.94□□□□□ -0.66
CCL1-201ENST00000225842 PLA2R1Q13018 1463 aa10.93□□□□□ -0.66
CCL1-201ENST00000225842 ATG7O95352 703 aa10.93□□□□□ -0.66
CCL1-201ENST00000225842 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCL1-201ENST00000225842 ZNF428Q96B54 188 aa10.93□□□□□ -0.66
CCL1-201ENST00000225842 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
CCL1-201ENST00000225842 IVNS1ABPQ9Y6Y0 642 aa10.93□□□□□ -0.66
CCL1-201ENST00000225842 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
CCL1-201ENST00000225842 ZNF518AQ6AHZ1 1483 aa10.93□□□□□ -0.66
CCL1-201ENST00000225842 TMEM88BA6NKF7 163 aa10.92□□□□□ -0.66
CCL1-201ENST00000225842 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
CCL1-201ENST00000225842 MORN1Q5T089 497 aa10.92□□□□□ -0.66
CCL1-201ENST00000225842 VPS9D1Q9Y2B5 631 aa10.92□□□□□ -0.66
CCL1-201ENST00000225842 SLC27A5Q9Y2P5 690 aa10.92□□□□□ -0.66
CCL1-201ENST00000225842 PRXQ9BXM0 1461 aa10.92□□□□□ -0.66
CCL1-201ENST00000225842 ZMYM3Q14202 1370 aa10.91□□□□□ -0.66
CCL1-201ENST00000225842 ERBB3P21860 1342 aa10.91□□□□□ -0.66
CCL1-201ENST00000225842 CPS1P31327 1500 aa10.91□□□□□ -0.66
CCL1-201ENST00000225842 ATP9BO43861 1147 aa10.91□□□□□ -0.66
CCL1-201ENST00000225842 RBM25P49756 843 aaKnown RBP10.91□□□□□ -0.66
CCL1-201ENST00000225842 AGLP35573 1532 aa10.89□□□□□ -0.67
CCL1-201ENST00000225842 SHANK2Q9UPX8 1470 aa10.89□□□□□ -0.67
CCL1-201ENST00000225842 NR1H3Q13133 447 aa10.89□□□□□ -0.67
CCL1-201ENST00000225842 Q3C1V9 767 aa10.89□□□□□ -0.67
CCL1-201ENST00000225842 LAPTM4BQ86VI4 370 aa10.89□□□□□ -0.67
CCL1-201ENST00000225842 PIK3CDO00329 1044 aa10.88□□□□□ -0.67
CCL1-201ENST00000225842 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
CCL1-201ENST00000225842 DESI1Q6ICB0 168 aa10.88□□□□□ -0.67
CCL1-201ENST00000225842 LYPD8Q6UX82 237 aa10.88□□□□□ -0.67
CCL1-201ENST00000225842 ZFRQ96KR1 1074 aaKnown RBP10.88□□□□□ -0.67
CCL1-201ENST00000225842 NBPF3Q9H094 633 aa10.88□□□□□ -0.67
CCL1-201ENST00000225842 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
CCL1-201ENST00000225842 RNF19BQ6ZMZ0 732 aa10.87□□□□□ -0.67
CCL1-201ENST00000225842 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
CCL1-201ENST00000225842 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms