RNA–Protein interactions for RNA: ENSMUST00000130360.1

Synpo-206, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 5,159 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-206ENSMUST00000130360 Hnrnpul1Q8VDM6 859 aaKnown RBP19.54■□□□□ 0.72
Synpo-206ENSMUST00000130360 PaskQ8CEE6 1383 aa19.54■□□□□ 0.72
Synpo-206ENSMUST00000130360 Samd9lQ69Z37 1561 aa19.54■□□□□ 0.72
Synpo-206ENSMUST00000130360 Ptpdc1Q6NZK8 747 aa19.53■□□□□ 0.72
Synpo-206ENSMUST00000130360 Rhot2Q8JZN7 620 aa19.53■□□□□ 0.72
Synpo-206ENSMUST00000130360 SrrtQ99MR6 875 aaKnown RBP19.53■□□□□ 0.72
Synpo-206ENSMUST00000130360 Egfem1Q8C088 590 aa19.52■□□□□ 0.71
Synpo-206ENSMUST00000130360 Syce3B5KM66 88 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Dusp9Q7TNL7 452 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Pla2r1Q62028 1487 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Top1mtQ8R4U6 593 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Duxf3A0A0N4SV92 674 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Gcom1E9PZ54 550 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 MyzapQ3UIJ9 466 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Q3UPC7 1272 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 TmpoQ61033 693 aaKnown RBP19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Kdm3bQ6ZPY7 1562 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 TnmdQ9EP64 317 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Sbno1Q689Z5 1390 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Fmnl2A2APV2 1086 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Tpm4Q6IRU2 248 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Krt85Q9Z2T6 507 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Cep57l1Q8VDS7 400 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ppp6r1Q7TSI3 856 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 OptnQ8K3K8 584 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ftsj3Q9DBE9 838 aaKnown RBP19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Nup88Q8CEC0 753 aaKnown RBP19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ankrd44B2RXR6 993 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Cnnm3Q32NY4 713 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ddx19aQ61655 478 aaKnown RBP19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Wdr63B2RY71 923 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Dennd6aQ8BH65 605 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Tbc1d9Q3UYK3 1264 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 TimelessQ9R1X4 1197 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ggnbp2Q5SV77 696 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 Rcan3Q9JKK0 239 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 WizO88286 1684 aaKnown RBP19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 Cct4P80315 539 aaKnown RBP19.46■□□□□ 0.71
Synpo-206ENSMUST00000130360 FosbP13346 338 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Pmfbp1Q9WVQ0 1022 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Trappc8E9PWG2 1437 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Znf771Q8BJ90 317 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 TefQ9JLC6 301 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Atp10dQ8K2X1 1416 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Prkar2bP31324 416 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Me1P06801 572 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Bcl2l13P59017 434 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 TnikP83510 1323 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Supt6hQ62383 1726 aaKnown RBP19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cbx1P83917 185 aaKnown RBP19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Zmym3Q9JLM4 1370 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 CrcpO35427 148 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gnl3lQ6PGG6 577 aaKnown RBP19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Bag4Q8CI61 457 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Slc12a5Q91V14 1138 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Ppip5k1A2ARP1 1436 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Otud6bQ8K2H2 294 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 InsrP15208 1372 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Fkbp4P30416 458 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Babam1Q3UI43 333 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gimap6Q8K349 305 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Nkx1-2P42580 305 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Adgrl2Q8JZZ7 1487 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Hvcn1Q3U2S8 269 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gm10093D3YYI8 482 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gm10471E9Q1C7 252 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Hdac1O09106 482 aaKnown RBP19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Afap1Q80YS6 731 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Tmco3Q8BH01 678 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Odf2lQ9D478 642 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Stk38Q91VJ4 465 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Strn4P58404 760 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Rufy1Q8BIJ7 712 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Smc2Q8CG48 1191 aaKnown RBP19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 PxdnQ3UQ28 1475 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Adgrb2Q8CGM1 1561 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Lmo7E9PYF4 1699 aaKnown RBP19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cavin1O54724 392 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Dnaaf4Q8R368 420 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Krt82Q99M74 516 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Fam135bQ9DAI6 1403 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cfap58B2RW38 873 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Lrrc9Q8CDN9 1456 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 OvosQ3UU35 1456 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Mctp1E9PV86 951 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Disp1Q3TDN0 1521 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cdk13Q69ZA1 1511 aaKnown RBP19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Trim29Q8R2Q0 587 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 PtprgQ05909 1442 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Wdr33Q8K4P0 1330 aaKnown RBP19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Kdm5bQ80Y84 1544 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Ssh2Q5SW75 1423 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Kdm2bQ6P1G2 1309 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 CalrP14211 416 aaKnown RBP19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 LifrP42703 1092 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Mapkbp1Q6NS57 1503 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Shroom2A2ALU4 1481 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gapvd1Q6PAR5 1458 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Samm50Q8BGH2 469 aa19.39■□□□□ 0.69
Synpo-206ENSMUST00000130360 Def6Q8C2K1 630 aa19.39■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms