RNA–Protein interactions for RNA: ENSMUST00000090006.11

Itgb1-201, Transcript of Integrin beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Itgb1, Length 3,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb1-201ENSMUST00000090006 Abca5Q8K448 1642 aa17.22■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Znf521Q6KAS7 1311 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Zkscan7E9PVW1 718 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Pde4cQ3UEI1 686 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Cyp27a1Q9DBG1 533 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Lamc3Q9R0B6 1581 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Brpf1B2RRD7 1212 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 EvcP57680 1005 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Cnnm3Q32NY4 713 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Gpatch8A2A6A1 1505 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Gprasp1Q5U4C1 1347 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Rtf1A2AQ19 715 aaKnown RBP17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 FanclQ9CR14 375 aa17.21■□□□□ 0.35
Itgb1-201ENSMUST00000090006 Tpm1P58771 284 aa17.2■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Tshz3Q8CGV9 1081 aa17.2■□□□□ 0.34
Itgb1-201ENSMUST00000090006 PogzQ8BZH4 1409 aaKnown RBP17.2■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Oas2E9Q9A9 742 aa17.2■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Pdia3P27773 505 aaKnown RBP17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Drc7Q6V3W6 876 aa17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Naa30Q8CES0 364 aa17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 DroshaQ5HZJ0 1373 aaKnown RBP17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 4930548H24RikQ9D496 437 aa17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 LifrP42703 1092 aa17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 EappQ5BU09 281 aa17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Pmfbp1Q9WVQ0 1022 aa17.19■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Ints3Q7TPD0 1041 aaKnown RBP17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Mctp1E9PV86 951 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Mns1Q61884 491 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Trim27Q62158 513 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Zfp397Q7TNK4 527 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Ccdc178Q8CDV0 866 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Nup88Q8CEC0 753 aaKnown RBP17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Pof1bQ8K4L4 587 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 CenppQ9CZ92 286 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 TnmdQ9EP64 317 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Sall3Q62255 1320 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Gm45015A0A140LII9 184 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Gm18336A0A140LIU8 765 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Zkscan2G3X952 960 aa17.18■□□□□ 0.34
Itgb1-201ENSMUST00000090006 CalcaP70160 136 aa17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Nucb1Q02819 459 aaKnown RBP17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 BbxQ8VBW5 907 aa17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Ncapd2Q8K2Z4 1392 aa17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Arglu1Q3UL36 271 aaKnown RBP17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Ciz1Q8VEH2 845 aa17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Card6E9PWH2 1175 aa17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Kif3bQ61771 747 aa17.17■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Fhod3Q76LL6 1578 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Disp1Q3TDN0 1521 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Tmx1Q8VBT0 278 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Gnai1B2RSH2 354 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Tbc1d31Q6NXY1 996 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Cep135Q6P5D4 1140 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Spag5Q7TME2 1165 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Gnai3Q9DC51 354 aa17.16■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Arid4aF8VPQ2 1261 aaKnown RBP17.15■□□□□ 0.34
Itgb1-201ENSMUST00000090006 R3hcc1Q8BSI6 488 aa17.15■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Mbd5B1AYB6 1498 aa17.15■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Ncoa3O09000 1398 aa17.15■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Usp25P57080 1055 aa17.15■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Kif21bQ9QXL1 1668 aa17.14■□□□□ 0.34
Itgb1-201ENSMUST00000090006 Ankrd44B2RXR6 993 aa17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Puf60Q3UEB3 564 aaKnown RBP17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Rab11fip3Q8CHD8 1047 aa17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 SrrtQ99MR6 875 aaKnown RBP17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Zkscan5Q9Z1D8 819 aa17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Ano6Q6P9J9 911 aa17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Ube2hP62257 183 aa17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Cwc15Q9JHS9 229 aaKnown RBP17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Arhgef40Q3UPH7 1517 aa17.14■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Safb2Q80YR5 991 aaKnown RBP17.13■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Zmynd15Q8C0R7 736 aa17.13■□□□□ 0.33
Itgb1-201ENSMUST00000090006 MecomP14404 1042 aa17.13■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Cdc37l1Q9CZP7 335 aa17.13■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Paxbp1P58501 919 aa17.13■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Stk3Q9JI10 497 aa17.12■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Bcar3Q9QZK2 820 aa17.12■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Ppp6r3Q922D4 844 aa17.12■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Pes1Q9EQ61 584 aaKnown RBP17.12■□□□□ 0.33
Itgb1-201ENSMUST00000090006 FosbP13346 338 aa17.12■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Gm16486A0A1D5RMD1 1434 aa17.12■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Zkscan16A2ALW2 728 aa17.11■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Irx2P81066 474 aa17.11■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Ccdc102aQ3TMW1 549 aa17.11■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Nol11Q8BJW5 723 aaKnown RBP17.11■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Ppip5k1A2ARP1 1436 aa17.11■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Kif14L0N7N1 1674 aaKnown RBP17.11■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Ccer1Q9CQL2 403 aa17.1■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Fam135aQ6NS59 1506 aa17.1■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Dnajc2P54103 621 aaKnown RBP17.1■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Tnnt1O88346 262 aa17.1■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Kif2aP28740 705 aa17.1■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Hook1Q8BIL5 728 aa17.1■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Hnrnpul1Q8VDM6 859 aaKnown RBP17.1■□□□□ 0.33
Itgb1-201ENSMUST00000090006 AlkP97793 1621 aa17.09■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Q3TQI7 289 aaKnown RBP17.09■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Stx6Q9JKK1 255 aa17.09■□□□□ 0.33
Itgb1-201ENSMUST00000090006 CenpjQ569L8 1344 aa17.09■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Kiaa1107Q80TK0 1369 aa17.09■□□□□ 0.33
Itgb1-201ENSMUST00000090006 Mrps27Q8BK72 415 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms