RNA–Protein interactions for RNA: ENSMUST00000086430.4

Col5a2-201, Transcript of Collagen alpha-2(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a2, Length 6,625 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2-201ENSMUST00000086430 Lrrc45Q8CIM1 670 aa12.48□□□□□ -0.41
Col5a2-201ENSMUST00000086430 TatQ8QZR1 454 aa12.48□□□□□ -0.41
Col5a2-201ENSMUST00000086430 PnisrA2AJT4 805 aaKnown RBP12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Iqca1Q9CUL5 857 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 MicalclQ9D5U9 680 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Dhx8A2A4P0 1244 aaKnown RBP12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Exoc6bA6H5Z3 810 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Zranb3Q6NZP1 1069 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Q9D9H8 365 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 MycnP03966 462 aaKnown RBP12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Ell2Q3UKU1 639 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Evi5lH3BKQ3 813 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Pms1Q8K119 917 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Med4Q9CQA5 270 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Homer1Q9Z2Y3 366 aa12.47□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Mcm3P25206 812 aaKnown RBP12.46□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Map2k1P31938 393 aa12.46□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Lrrfip2Q91WK0 415 aa12.46□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Ccdc83Q9D4V3 305 aa12.46□□□□□ -0.41
Col5a2-201ENSMUST00000086430 Puf60Q3UEB3 564 aaKnown RBP12.46□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Smarca5Q91ZW3 1051 aaKnown RBP12.46□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.46□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Anapc15-psA0A140T8L6 141 aa12.46□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Pip4k2aO70172 405 aa12.46□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Luc7lQ9CYI4 371 aaKnown RBP12.46□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Pof1bQ8K4L4 587 aa12.45□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ggnbp2Q5SV77 696 aa12.45□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Atp2b2Q9R0K7 1198 aa12.45□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cdc45Q9Z1X9 566 aa12.45□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Pafah1b1P63005 410 aaKnown RBP12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Arhgef18Q6P9R4 1021 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Jade2Q6ZQF7 829 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ttc19Q8CC21 365 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Gcc1Q9D4H2 778 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ercc3P49135 783 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Zhx1P70121 873 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cux1P53564 1515 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Dhx29Q6PGC1 1365 aaKnown RBP12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Pabpn1Q8CCS6 302 aaKnown RBP12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Zscan20B2KFW1 1030 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Arglu1Q3UL36 271 aaKnown RBP12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Tspyl2Q7TQI8 677 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Fsd2Q8BZ52 692 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Galntl5Q9D4M9 431 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Soga1E1U8D0 1418 aa12.44□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Fbf1A2A870 1173 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Uri1Q3TLD5 531 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 CarsQ9ER72 831 aaKnown RBP12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Tspyl3Q3UYP3 334 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Adck5Q80V03 582 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cavin4A2AMM0 362 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Sirt1Q923E4 737 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cttnbp2B9EJA2 1648 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Gm7361D3Z6R1 267 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Fam13aQ8BGI4 693 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Rab3gap2Q8BMG7 1366 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ncoa2Q61026 1462 aa12.43□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Gas2l3Q3UWW6 683 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cep57l1Q8VDS7 400 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Sf3b2Q3UJB0 878 aaKnown RBP12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Nup133Q8R0G9 1155 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ptpdc1Q6NZK8 747 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Rufy2Q8R4C2 606 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cdc37l1Q9CZP7 335 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Zeb2Q9R0G7 1215 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 IncenpQ9WU62 880 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Phldb1Q6PDH0 1371 aaKnown RBP12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Jakmip2D3YXK0 820 aa12.42□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Arhgap5P97393 1501 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ddx54Q8K4L0 874 aaKnown RBP12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ccdc39Q9D5Y1 937 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Atf3Q60765 181 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 LrpprcQ6PB66 1392 aaKnown RBP12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cyp26c1B2RXA7 518 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Brf1Q8CFK2 676 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Smarca2Q6DIC0 1577 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Gm18336A0A140LIU8 765 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Dusp27Q148W8 1138 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Ncapg2Q6DFV1 1138 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Top1mtQ8R4U6 593 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Rnf34Q99KR6 376 aa12.41□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Smarca4Q3TKT4 1613 aaKnown RBP12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Gnl3lQ6PGG6 577 aaKnown RBP12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Cfap45Q9D9U9 551 aa12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Skor1Q8BX46 964 aa12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Sugp2Q8CH09 1067 aa12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Prl7d1P04769 244 aa12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Rcan3Q9JKK0 239 aa12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 Irgm2A0A140LIF8 407 aa12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 HypkQ9CR41 129 aa12.4□□□□□ -0.42
Col5a2-201ENSMUST00000086430 TchpQ3TVW5 497 aa12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 L1td1Q587J6 782 aaKnown RBP12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 Rbm27Q5SFM8 1060 aaKnown RBP12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 TxlnaQ6PAM1 554 aaKnown RBP12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 Maco1Q7TQE6 664 aaKnown RBP12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 Ccdc178Q8CDV0 866 aa12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 Ccdc112A0AUP1 442 aa12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 Gjc1P28229 396 aa12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 Stard3nlQ9DCI3 235 aa12.39□□□□□ -0.43
Col5a2-201ENSMUST00000086430 Atp2b1G5E829 1220 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 152.1 ms