RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Olr1Q9EQ09 363 aa13.15□□□□□ -0.3
Rtn3-202ENSMUST00000065304 Fan1Q69ZT1 1020 aa13.15□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Anapc15-psA0A140T8L6 141 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Zscan20B2KFW1 1030 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Trim25Q61510 634 aaKnown RBP13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Cnksr2Q80YA9 1032 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ccdc172Q810N9 267 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Gcc1Q9D4H2 778 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Frmd3Q8BHD4 595 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ccdc73Q8CDM4 1066 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Rnf34Q99KR6 376 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ccdc171E9Q1U1 1324 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Nup155Q99P88 1391 aaKnown RBP13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Nup88Q8CEC0 753 aaKnown RBP13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Syap1Q9D5V6 365 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Sdccag8Q80UF4 717 aa13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 IkQ9Z1M8 557 aaKnown RBP13.14□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Sv2bQ8BG39 683 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 MvpQ9EQK5 861 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Gbp2Q9Z0E6 589 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Mcm3P25206 812 aaKnown RBP13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Pde1cQ64338 706 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 RalylQ8BTF8 293 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Krt7Q9DCV7 457 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Cabp1Q9JLK7 227 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Pdia4P08003 638 aaKnown RBP13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Zrsr1Q64707 428 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Swt1Q9DBQ9 907 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Uri1Q3TLD5 531 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Hspa4Q61316 841 aa13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Abcf1Q6P542 837 aaKnown RBP13.13□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Rb1cc1Q9ESK9 1588 aa13.12□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Tnpo1Q8BFY9 898 aaKnown RBP13.12□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Krt84Q99M73 603 aa13.12□□□□□ -0.31
Rtn3-202ENSMUST00000065304 PdiltQ9DAN1 588 aa13.12□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ctr9Q62018 1173 aaKnown RBP13.12□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Washc2Q6PGL7 1334 aa13.12□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Gle1Q8R322 699 aa13.12□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Kiaa1524Q8BWY9 907 aa13.11□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Calml4Q91WQ9 153 aa13.11□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Brms1Q99N20 246 aa13.11□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ccdc6D3YZP9 469 aa13.11□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Gm1979E9QAN3 267 aa13.11□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Washc4Q3UMB9 1173 aa13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ccdc30Q8BVF4 654 aa13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Dhx57Q6P5D3 1388 aaKnown RBP13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Tsg101Q61187 391 aa13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Hsf2bpQ9D4G2 338 aa13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Cbx1P83917 185 aaKnown RBP13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Rab3il1Q8VDV3 383 aa13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Vps41Q5KU39 853 aa13.1□□□□□ -0.31
Rtn3-202ENSMUST00000065304 BcanQ61361 883 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 MlecQ6ZQI3 291 aaKnown RBP13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Cc2d1bQ8BRN9 848 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Taok3Q8BYC6 898 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Map7d1A2AJI0 846 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ercc3P49135 783 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Slc38a10Q5I012 1090 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ctnna2Q61301 953 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Stk3Q9JI10 497 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Gm21190A0A0G2JGJ6 266 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Knop1Q9Z2Q2 478 aaKnown RBP13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Arhgap35Q91YM2 1499 aa13.09□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Apol7aB2RT54 418 aa13.08□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Ankrd24Q80VM7 985 aa13.08□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Inpp5dQ9ES52 1191 aa13.08□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Wdr33Q8K4P0 1330 aaKnown RBP13.08□□□□□ -0.31
Rtn3-202ENSMUST00000065304 Sh2d4bA6X942 431 aa13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Hmgb1P63158 215 aaKnown RBP13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Babam1Q3UI43 333 aa13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Stard3nlQ9DCI3 235 aa13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Ttll13A4Q9F6 804 aa13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 PsapQ61207 557 aaKnown RBP13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Gse1Q3U3C9 1213 aa13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Paxip1Q6NZQ4 1056 aa13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Nop53Q8BK35 484 aaKnown RBP13.08□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Fsd1Q7TPM6 496 aa13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Mphosph10Q810V0 681 aaKnown RBP13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Rsrc1Q9DBU6 334 aa13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Baz1bQ9Z277 1479 aa13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 E9QMW4 1145 aa13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Ehbp1Q69ZW3 1231 aa13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Plekhh1Q80TI1 1356 aa13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 ImmtQ8CAQ8 757 aaKnown RBP13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Ctnnbl1Q9CWL8 563 aaKnown RBP13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Mkrn1Q9QXP6 481 aa13.07□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Iqca1Q9CUL5 857 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Arid3cA6PWV5 409 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Dact3Q0PHV7 610 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Tmco5aQ9D9D5 303 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Gm21680A0A0G2JGR8 267 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Cbfa2t2O70374 594 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Esx1O88933 382 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Trim11Q99PQ2 467 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Nphp1Q9QY53 687 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Smarcc1P97496 1104 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Zscan10Q3URR7 782 aa13.06□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Camk4P08414 469 aa13.05□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Stmn4P63042 189 aa13.05□□□□□ -0.32
Rtn3-202ENSMUST00000065304 Ccdc150Q8CDI7 1110 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 90.4 ms