RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Bag1Q60739 355 aa17.45■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Dnaaf4Q8R368 420 aa17.45■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 TbcaP48428 108 aaKnown RBP17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Erc1Q99MI1 1120 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 PrxO55103 1391 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 NefhP19246 1090 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Ncbp1Q3UYV9 790 aaKnown RBP17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Commd10Q8JZY2 202 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 ZgpatQ8VDM1 511 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Sel1lQ9Z2G6 790 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Erlin2Q8BFZ9 340 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Wasf1Q8R5H6 559 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Cep131Q62036 1060 aa17.44■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Cfap58B2RW38 873 aa17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Lrrc45Q8CIM1 670 aa17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Lmbr1Q9JIT0 490 aa17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Pmfbp1Q9WVQ0 1022 aa17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 PalmQ9Z0P4 383 aa17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 AqrQ8CFQ3 1481 aaKnown RBP17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Rbm5Q91YE7 815 aaKnown RBP17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Prpf4bQ61136 1007 aaKnown RBP17.43■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Ubap1lG3UW59 384 aa17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 DroshaQ5HZJ0 1373 aaKnown RBP17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Mrc2Q64449 1479 aa17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Nup88Q8CEC0 753 aaKnown RBP17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 CenpqQ9CPQ5 267 aa17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Cct4P80315 539 aaKnown RBP17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Aldh1l1Q8R0Y6 902 aa17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 SrrtQ99MR6 875 aaKnown RBP17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Cfap45Q9D9U9 551 aa17.42■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Ppip5k2Q6ZQB6 1129 aa17.41■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Trim34aQ99PP6 485 aa17.41■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Ssh1Q76I79 1042 aa17.41■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Sf3b2Q3UJB0 878 aaKnown RBP17.41■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Mum1Q6DID5 682 aa17.41■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Ptpdc1Q6NZK8 747 aa17.41■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Pknox2Q8BG99 474 aa17.41■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Igf1rQ60751 1373 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Zscan20B2KFW1 1030 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Ppp1r15aP17564 657 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Fsd1Q7TPM6 496 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Chrna2Q91X60 512 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Samd1D3YXK1 519 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 TmpoQ61033 693 aaKnown RBP17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Stk11ipQ3TAA7 1072 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Paf1Q8K2T8 535 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Tmc1Q8R4P5 757 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Mctp1E9PV86 951 aa17.4■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Lrrfip1Q3UZ39 729 aaKnown RBP17.39■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Riok1Q922Q2 567 aa17.39■□□□□ 0.38
Pcdh20-201ENSMUST00000061628 Afap1Q80YS6 731 aa17.39■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Rfx7F8VPJ6 1459 aa17.39■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Def6Q8C2K1 630 aa17.39■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Cep89Q9CZX2 791 aa17.39■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Fsd2Q8BZ52 692 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Naip2Q9QUK4 1447 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gm1043A0A140LJC2 1431 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gm21663A0A0G2JE01 267 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gm7361D3Z6R1 267 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 5031410I06RikE9Q4E0 267 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gm1979E9QAN3 267 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Evi5lH3BKQ3 813 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gm5862K7N5V5 267 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gm10220K7N660 267 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Adck5Q80V03 582 aa17.38■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Eif3bQ8JZQ9 803 aaKnown RBP17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Kcnh5Q920E3 988 aa17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Speer4bQ9D9F7 267 aa17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Rufy2Q8R4C2 606 aa17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gtf2a1Q99PM3 378 aa17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Maco1Q7TQE6 664 aaKnown RBP17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Rapgef4Q9EQZ6 1011 aa17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Zeb2Q9R0G7 1215 aa17.37■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Irgm2A0A140LIF8 407 aa17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Fam13bQ8K2H3 851 aa17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Hmgb2P30681 210 aaKnown RBP17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Babam1Q3UI43 333 aa17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Polr3aB2RXC6 1390 aa17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 CalrP14211 416 aaKnown RBP17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Map9Q3TRR0 646 aa17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Btbd11Q6GQW0 1109 aa17.36■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Ggnbp2Q5SV77 696 aa17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Gm21680A0A0G2JGR8 267 aa17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Exoc6bA6H5Z3 810 aa17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Mug1P28665 1476 aa17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Abcd1P48410 736 aa17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Eif5P59325 429 aaKnown RBP17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Caskin1Q6P9K8 1431 aa17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 GphnQ8BUV3 769 aaKnown RBP17.35■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Mapk8ip1Q9WVI9 707 aa17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 A2mQ6GQT1 1474 aa17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Jakmip2D3YXK0 820 aa17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Ccdc102aQ3TMW1 549 aa17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Wdr33Q8K4P0 1330 aaKnown RBP17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Ddx19aQ61655 478 aaKnown RBP17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Larp1Q6ZQ58 1072 aaKnown RBP17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Ttc19Q8CC21 365 aa17.34■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Ttc21bQ0HA38 1315 aa17.33■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Pms1Q8K119 917 aa17.33■□□□□ 0.37
Pcdh20-201ENSMUST00000061628 Sytl4Q9R0Q1 673 aa17.33■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms