RNA–Protein interactions for RNA: ENSMUST00000047145.13

Trim41-201, Transcript of E3 ubiquitin-protein ligase TRIM41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim41, Length 3,432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41-201ENSMUST00000047145 Uspl1Q3ULM6 1089 aa18.53■□□□□ 0.56
Trim41-201ENSMUST00000047145 Ccar1Q8CH18 1146 aaKnown RBP18.53■□□□□ 0.56
Trim41-201ENSMUST00000047145 ImpactO55091 318 aa18.52■□□□□ 0.56
Trim41-201ENSMUST00000047145 Nol7Q9D7Z3 254 aaKnown RBP18.52■□□□□ 0.56
Trim41-201ENSMUST00000047145 Kif4P33174 1231 aa18.51■□□□□ 0.55
Trim41-201ENSMUST00000047145 Shq1Q7TMX5 569 aa18.51■□□□□ 0.55
Trim41-201ENSMUST00000047145 Ppp1r3fQ9JIG4 799 aa18.51■□□□□ 0.55
Trim41-201ENSMUST00000047145 Gm973E9Q295 1059 aa18.51■□□□□ 0.55
Trim41-201ENSMUST00000047145 U2surpQ6NV83 1029 aaKnown RBP18.51■□□□□ 0.55
Trim41-201ENSMUST00000047145 Fez2Q6TYB5 348 aa18.51■□□□□ 0.55
Trim41-201ENSMUST00000047145 Abcc6Q9R1S7 1498 aa18.5■□□□□ 0.55
Trim41-201ENSMUST00000047145 Ppp1r18Q8BQ30 594 aa18.5■□□□□ 0.55
Trim41-201ENSMUST00000047145 Pwp2Q8BU03 919 aaKnown RBP18.5■□□□□ 0.55
Trim41-201ENSMUST00000047145 Cc2d1aQ8K1A6 943 aa18.5■□□□□ 0.55
Trim41-201ENSMUST00000047145 Hvcn1Q3U2S8 269 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Inpp5bQ8K337 993 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Casc1Q6TDU8 730 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Serpinb6bO08804 377 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Adcy5P84309 1262 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Nol12Q8BG17 217 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Gtf3c6Q9D8P7 227 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Sh3bp5Q9Z131 463 aa18.49■□□□□ 0.55
Trim41-201ENSMUST00000047145 Phlpp2Q8BXA7 1320 aa18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 Pbrm1Q8BSQ9 1634 aaKnown RBP18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 Adam1bQ8R534 806 aa18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 PtmsQ9D0J8 101 aaKnown RBP18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 Utp3Q9JI13 469 aaKnown RBP18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 ScaperF8VQ70 1398 aaKnown RBP18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 CebpzP53569 1052 aaKnown RBP18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 Irx5Q9JKQ4 484 aa18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 Tnnt1O88346 262 aa18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 CastP51125 788 aa18.48■□□□□ 0.55
Trim41-201ENSMUST00000047145 Glipr1l2Q9CQ35 332 aa18.47■□□□□ 0.55
Trim41-201ENSMUST00000047145 Sytl4Q9R0Q1 673 aa18.47■□□□□ 0.55
Trim41-201ENSMUST00000047145 Eif4g3Q80XI3 1579 aaKnown RBP18.47■□□□□ 0.55
Trim41-201ENSMUST00000047145 Plch2A2AP18 1501 aa18.47■□□□□ 0.55
Trim41-201ENSMUST00000047145 Utp14aQ640M1 767 aaKnown RBP18.47■□□□□ 0.55
Trim41-201ENSMUST00000047145 Usp19Q3UJD6 1360 aa18.47■□□□□ 0.55
Trim41-201ENSMUST00000047145 Znf608Q56A10 1511 aa18.47■□□□□ 0.55
Trim41-201ENSMUST00000047145 Dnajc2P54103 621 aaKnown RBP18.46■□□□□ 0.55
Trim41-201ENSMUST00000047145 Zmym3Q9JLM4 1370 aa18.46■□□□□ 0.55
Trim41-201ENSMUST00000047145 Kdm4aQ8BW72 1064 aa18.46■□□□□ 0.55
Trim41-201ENSMUST00000047145 Bach1P97302 739 aa18.46■□□□□ 0.55
Trim41-201ENSMUST00000047145 Ccdc34Q3UI66 367 aa18.46■□□□□ 0.55
Trim41-201ENSMUST00000047145 AatfQ9JKX4 526 aaKnown RBP18.46■□□□□ 0.55
Trim41-201ENSMUST00000047145 Iqgap1Q9JKF1 1657 aaKnown RBP18.46■□□□□ 0.54
Trim41-201ENSMUST00000047145 CenpjQ569L8 1344 aa18.46■□□□□ 0.54
Trim41-201ENSMUST00000047145 Chrm1P12657 460 aa18.45■□□□□ 0.54
Trim41-201ENSMUST00000047145 Zpr1Q62384 459 aa18.45■□□□□ 0.54
Trim41-201ENSMUST00000047145 Dixdc1Q80Y83 711 aa18.45■□□□□ 0.54
Trim41-201ENSMUST00000047145 KnstrnQ9D9Z1 312 aaKnown RBP18.45■□□□□ 0.54
Trim41-201ENSMUST00000047145 Tulp4Q9JIL5 1547 aa18.45■□□□□ 0.54
Trim41-201ENSMUST00000047145 Rusc2Q80U22 1514 aa18.45■□□□□ 0.54
Trim41-201ENSMUST00000047145 Pibf1E9Q6K3 756 aa18.45■□□□□ 0.54
Trim41-201ENSMUST00000047145 Gm45140A0A0N4SUM8 220 aa18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 Atp2b1G5E829 1220 aa18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 Gm10093D3YYI8 482 aa18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 AU019823E9PUQ3 292 aa18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 Hdac1O09106 482 aaKnown RBP18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 Cdkn1cP49919 348 aa18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 Atl3Q91YH5 541 aa18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 Sbno1Q689Z5 1390 aa18.44■□□□□ 0.54
Trim41-201ENSMUST00000047145 Q9D9H8 365 aa18.43■□□□□ 0.54
Trim41-201ENSMUST00000047145 Atf7ipQ7TT18 1306 aa18.43■□□□□ 0.54
Trim41-201ENSMUST00000047145 Adamts13Q769J6 1426 aa18.43■□□□□ 0.54
Trim41-201ENSMUST00000047145 E4f1Q8CCE9 783 aa18.43■□□□□ 0.54
Trim41-201ENSMUST00000047145 Irx6Q9ER75 438 aa18.43■□□□□ 0.54
Trim41-201ENSMUST00000047145 Nek4Q9Z1J2 792 aa18.43■□□□□ 0.54
Trim41-201ENSMUST00000047145 Kiaa1107Q80TK0 1369 aa18.43■□□□□ 0.54
Trim41-201ENSMUST00000047145 Zkscan1Q8BGS3 561 aaKnown RBP18.42■□□□□ 0.54
Trim41-201ENSMUST00000047145 Mast1Q9R1L5 1570 aa18.42■□□□□ 0.54
Trim41-201ENSMUST00000047145 Ccdc173A0JLY1 547 aa18.42■□□□□ 0.54
Trim41-201ENSMUST00000047145 Rtel1Q0VGM9 1203 aa18.42■□□□□ 0.54
Trim41-201ENSMUST00000047145 SrrtQ99MR6 875 aaKnown RBP18.42■□□□□ 0.54
Trim41-201ENSMUST00000047145 Syt10Q9R0N4 523 aa18.41■□□□□ 0.54
Trim41-201ENSMUST00000047145 Rbm25B2RY56 838 aaKnown RBP18.41■□□□□ 0.54
Trim41-201ENSMUST00000047145 Gdpd2Q9ESM6 539 aa18.41■□□□□ 0.54
Trim41-201ENSMUST00000047145 G3bp1P97855 465 aaKnown RBP18.4■□□□□ 0.54
Trim41-201ENSMUST00000047145 Ppm1eQ80TL0 749 aa18.4■□□□□ 0.54
Trim41-201ENSMUST00000047145 P2rx7Q9Z1M0 595 aa18.4■□□□□ 0.54
Trim41-201ENSMUST00000047145 Dnmt1P13864 1620 aaKnown RBP18.4■□□□□ 0.54
Trim41-201ENSMUST00000047145 Cpa2Q504N0 417 aa18.4■□□□□ 0.54
Trim41-201ENSMUST00000047145 CenpqQ9CPQ5 267 aa18.4■□□□□ 0.54
Trim41-201ENSMUST00000047145 Tbc1d31Q6NXY1 996 aa18.4■□□□□ 0.54
Trim41-201ENSMUST00000047145 RdxP26043 583 aaKnown RBP18.39■□□□□ 0.54
Trim41-201ENSMUST00000047145 Ice2Q3UZ18 988 aaKnown RBP18.39■□□□□ 0.54
Trim41-201ENSMUST00000047145 Ddx41Q91VN6 622 aaKnown RBP18.39■□□□□ 0.53
Trim41-201ENSMUST00000047145 Maco1Q7TQE6 664 aaKnown RBP18.38■□□□□ 0.53
Trim41-201ENSMUST00000047145 Zkscan5Q9Z1D8 819 aa18.38■□□□□ 0.53
Trim41-201ENSMUST00000047145 Oas2E9Q9A9 742 aa18.38■□□□□ 0.53
Trim41-201ENSMUST00000047145 Gapvd1Q6PAR5 1458 aa18.37■□□□□ 0.53
Trim41-201ENSMUST00000047145 Usp54Q8BL06 1588 aaKnown RBP18.37■□□□□ 0.53
Trim41-201ENSMUST00000047145 Ift57Q8BXG3 429 aa18.37■□□□□ 0.53
Trim41-201ENSMUST00000047145 Slc7a3P70423 618 aa18.37■□□□□ 0.53
Trim41-201ENSMUST00000047145 Zfp397Q7TNK4 527 aa18.37■□□□□ 0.53
Trim41-201ENSMUST00000047145 Iqca1Q9CUL5 857 aa18.37■□□□□ 0.53
Trim41-201ENSMUST00000047145 Map4k4P97820 1233 aaKnown RBP18.36■□□□□ 0.53
Trim41-201ENSMUST00000047145 Rassf4Q8CB96 322 aa18.36■□□□□ 0.53
Trim41-201ENSMUST00000047145 Ppip5k1A2ARP1 1436 aa18.36■□□□□ 0.53
Trim41-201ENSMUST00000047145 AatkQ80YE4 1365 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms