RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Tbc1d9Q3UYK3 1264 aa14.94□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 TmpoQ61033 693 aaKnown RBP14.93□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Dennd6aQ8BH65 605 aa14.93□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Fez1Q8K0X8 392 aa14.93□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Stk3Q9JI10 497 aa14.93□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Ythdc2B2RR83 1445 aaKnown RBP14.93□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Fyb1O35601 819 aa14.93□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Plch2A2AP18 1501 aa14.93□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Paxip1Q6NZQ4 1056 aa14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Mphosph10Q810V0 681 aaKnown RBP14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Lrrc7Q80TE7 1490 aa14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 EzrP26040 586 aaKnown RBP14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Nol12Q8BG17 217 aa14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 PhaxQ9JJT9 385 aaKnown RBP14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Cwc27Q3TKY6 469 aa14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Tarbp1E9Q368 1579 aa14.92□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Mad1l1Q9WTX8 717 aaKnown RBP14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 ScaperF8VQ70 1398 aaKnown RBP14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Anapc15-psA0A140T8L6 141 aa14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 AppP12023 770 aa14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Anapc15P60007 132 aa14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Chmp7Q8R1T1 451 aa14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Kif1bQ60575 1816 aaKnown RBP14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Talpid3E9PV87 1520 aa14.91□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Ptpdc1Q6NZK8 747 aa14.9□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 TatQ8QZR1 454 aa14.9□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Smarca5Q91ZW3 1051 aaKnown RBP14.9□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Mroh2aD3Z750 1679 aa14.9□□□□□ -0.02
Pdlim5-201ENSMUST00000029941 Calcoco2A2A6M5 331 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Brd1E9PZ26 1189 aaKnown RBP14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Hmgn5Q9JL35 406 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Psma5Q9Z2U1 241 aaKnown RBP14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Prkar2bP31324 416 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 LifrP42703 1092 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Idi2Q8BFZ6 227 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Jakmip1Q8BVL9 626 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Bicd2Q921C5 820 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 ImpactO55091 318 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 HdgfP51859 237 aaKnown RBP14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 HnrnpmQ9D0E1 729 aaKnown RBP14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Col17a1Q07563 1470 aa14.89□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Zranb1Q7M760 708 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Usp54Q8BL06 1588 aaKnown RBP14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Usp48Q3V0C5 1052 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 AatkQ80YE4 1365 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Gm10093D3YYI8 482 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Hdac1O09106 482 aaKnown RBP14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Polr3gQ6NXY9 223 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Rlbp1Q9Z275 317 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Lrriq1Q0P5X1 1673 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 AU019823E9PUQ3 292 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Trpm2Q91YD4 1506 aa14.88□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Clstn1Q9EPL2 979 aa14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Kdm5aQ3UXZ9 1690 aa14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Catsper2A2ARP9 588 aa14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Srek1Q8BZX4 494 aaKnown RBP14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 PdcQ9QW08 244 aa14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Gli2Q0VGT2 1544 aa14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Tpm3-rs7D3Z2H9 248 aa14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Tpm3P21107 285 aaKnown RBP14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Smc4Q8CG47 1286 aa14.87□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Ankrd50F7BE84 1390 aa14.86□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Usp19Q3UJD6 1360 aa14.86□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Bcl2l13P59017 434 aa14.86□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Q9D9S1 216 aa14.86□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Znf518aB2RRF6 1478 aaKnown RBP14.86□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Ncbp3Q8BZR9 615 aaKnown RBP14.86□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.86□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 NaspQ99MD9 773 aaKnown RBP14.85□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Kif3aP28741 701 aa14.85□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Neurod6P48986 337 aa14.85□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Trim27Q62158 513 aa14.85□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Myom2Q14BI5 1463 aa14.85□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Mcm10Q0VBD2 885 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Olfml1Q8BSH2 233 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Q8C5K5 320 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Cep170Q6A065 1588 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Plxnc1Q9QZC2 1574 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Scaf11E9PZM7 1456 aaKnown RBP14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Hoxb7P09024 217 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 PsapQ61207 557 aaKnown RBP14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Bag4Q8CI61 457 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Setd1aE9PYH6 1716 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Tpd52l1O54818 204 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Eif3aP23116 1344 aaKnown RBP14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Fkbp4P30416 458 aa14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Ccdc47Q9D024 483 aaKnown RBP14.84□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 KdrP35918 1367 aa14.83□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Tulp4Q9JIL5 1547 aa14.83□□□□□ -0.03
Pdlim5-201ENSMUST00000029941 Ppp1r42Q8R1Z4 357 aa14.83□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Syce3B5KM66 88 aa14.83□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Cavin2Q63918 418 aaKnown RBP14.83□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Pik3r4Q8VD65 1358 aa14.83□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Ttc21aQ8C0S4 1314 aa14.82□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Q3UJC8 639 aa14.82□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Uggt2E9Q4X2 1504 aa14.82□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Rasa1E9PYG6 1038 aa14.82□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 CenppQ9CZ92 286 aa14.82□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Vamp4O70480 141 aa14.81□□□□□ -0.04
Pdlim5-201ENSMUST00000029941 Aldh8a1Q8BH00 487 aa14.81□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms