RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 TbcaP48428 108 aaKnown RBP16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Als2cr12Q8BVM7 383 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 SrrtQ99MR6 875 aaKnown RBP16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Vps8Q0P5W1 1427 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Bbof1Q3V079 533 aa16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Cfap53Q9D439 514 aa16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 IkQ9Z1M8 557 aaKnown RBP16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Rad54l2Q99NG0 1466 aa16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 SltmQ8CH25 1031 aaKnown RBP16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Eif3j1Q3UGC7 261 aaKnown RBP16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Eif3j2Q66JS6 263 aa16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Ttll5Q8CHB8 1328 aa16.35■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Jade2Q6ZQF7 829 aa16.34■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Jakmip3Q5DTN8 844 aa16.34■□□□□ 0.21
Col5a1-201ENSMUST00000028280 PdiltQ9DAN1 588 aa16.34■□□□□ 0.21
Col5a1-201ENSMUST00000028280 LarsQ8BMJ2 1178 aa16.34■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Gigyf2Q6Y7W8 1291 aaKnown RBP16.33■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Cetn2Q9R1K9 172 aa16.33■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Cyp26c1B2RXA7 518 aa16.33■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Plagl1Q9JLQ4 704 aa16.33■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Ehmt1Q5DW34 1296 aa16.33■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Maats1Q8BRC6 783 aa16.33■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Chrna2Q91X60 512 aa16.33■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Nutm1Q8BHP2 1126 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Rpgrip1lQ8CG73 1264 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Sept7O55131 436 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Kcnh8P59111 1102 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Mphosph10Q810V0 681 aaKnown RBP16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Rab3gap2Q8BMG7 1366 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Nectin2P32507 530 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Prl7d1P04769 244 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Uri1Q3TLD5 531 aa16.32■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Gnai2P08752 355 aaKnown RBP16.31■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Lrrfip1Q3UZ39 729 aaKnown RBP16.31■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Cep131Q62036 1060 aa16.31■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Luzp1Q8R4U7 1068 aaKnown RBP16.31■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Mnat1P51949 309 aa16.3■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Washc4Q3UMB9 1173 aa16.3■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Ctr9Q62018 1173 aaKnown RBP16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Lmbr1Q9JIT0 490 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Trap1aP19473 224 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Cdkl5Q3UTQ8 938 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Shtn1Q8K2Q9 631 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Rnf34Q99KR6 376 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Arhgap5P97393 1501 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 DmtnQ9WV69 405 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Ercc3P49135 783 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Dusp27Q148W8 1138 aa16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Nup88Q8CEC0 753 aaKnown RBP16.29■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Cavin4A2AMM0 362 aa16.28■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Syce3B5KM66 88 aa16.28■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Samm50Q8BGH2 469 aa16.28■□□□□ 0.2
Col5a1-201ENSMUST00000028280 RalylQ8BTF8 293 aa16.28■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Cavin1O54724 392 aa16.28■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Cep57l1Q8VDS7 400 aa16.27■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Zpr1Q62384 459 aa16.27■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Gm1979E9QAN3 267 aa16.27■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Vps37cQ8R105 352 aa16.27■□□□□ 0.2
Col5a1-201ENSMUST00000028280 Ssh1Q76I79 1042 aa16.27■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Gm21671G3UY31 267 aa16.27■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Nap1l2P51860 460 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 TefQ9JLC6 301 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Hspa4Q61316 841 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Rhot2Q8JZN7 620 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Cdc45Q9Z1X9 566 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Paxbp1P58501 919 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Gm44503E9PYU5 387 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Ccdc73Q8CDM4 1066 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Ccdc39Q9D5Y1 937 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 SlmapQ3URD3 845 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Sytl4Q9R0Q1 673 aa16.26■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Plekhd1B2RPU2 505 aa16.25■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Fsd1Q7TPM6 496 aa16.25■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Zeb2Q9R0G7 1215 aa16.25■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Tex19.1Q99MV2 351 aa16.25■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Jakmip1Q8BVL9 626 aa16.25■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Wdr33Q8K4P0 1330 aaKnown RBP16.24■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Phldb1Q6PDH0 1371 aaKnown RBP16.24■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Iffo1Q8BXL9 562 aa16.24■□□□□ 0.19
Col5a1-201ENSMUST00000028280 ScaperF8VQ70 1398 aaKnown RBP16.24■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Cecr2E9Q2Z1 1453 aa16.24■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Zscan20B2KFW1 1030 aa16.24■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Iqca1Q9CUL5 857 aa16.23■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Naa15Q80UM3 865 aaKnown RBP16.23■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Paip2Q9D6V8 124 aa16.23■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Nphp1Q9QY53 687 aa16.23■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Znf692Q3U381 531 aa16.23■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Vps41Q5KU39 853 aa16.23■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Ccdc93Q7TQK5 629 aa16.23■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Knop1Q9Z2Q2 478 aaKnown RBP16.22■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Cc2d1bQ8BRN9 848 aa16.22■□□□□ 0.19
Col5a1-201ENSMUST00000028280 HypkQ9CR41 129 aa16.22■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Sptbn5F6UCX4 1208 aa16.21■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Rufy2Q8R4C2 606 aa16.21■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Ctnnbl1Q9CWL8 563 aaKnown RBP16.21■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Gbp1Q01514 589 aa16.21■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Ift140E9PY46 1464 aa16.21■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Smtnl1Q99LM3 459 aa16.21■□□□□ 0.19
Col5a1-201ENSMUST00000028280 Gbp2Q9Z0E6 589 aa16.21■□□□□ 0.19
Col5a1-201ENSMUST00000028280 PsapQ61207 557 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms