RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Nup160Q9Z0W3 1402 aaKnown RBP15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 Tsen2Q6P7W5 460 aa15.08■□□□□ 0.01
Trim23-201ENSMUST00000022225 U2af2P26369 475 aaKnown RBP15.08■□□□□ 0
Trim23-201ENSMUST00000022225 G3bp1P97855 465 aaKnown RBP15.08■□□□□ 0
Trim23-201ENSMUST00000022225 Ppp6r3Q922D4 844 aa15.08■□□□□ 0
Trim23-201ENSMUST00000022225 Trpm1Q2TV84 1622 aa15.08■□□□□ 0
Trim23-201ENSMUST00000022225 Spag9Q58A65 1321 aaKnown RBP15.08■□□□□ 0
Trim23-201ENSMUST00000022225 Cers3Q1A3B0 383 aa15.08■□□□□ 0
Trim23-201ENSMUST00000022225 Bms1Q6PGF5 1284 aaKnown RBP15.08■□□□□ 0
Trim23-201ENSMUST00000022225 Os9Q8K2C7 672 aa15.08■□□□□ 0
Trim23-201ENSMUST00000022225 Cnga1P29974 684 aa15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Mx2Q9WVP9 655 aa15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Nsd2Q8BVE8 1365 aa15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Elp1Q7TT37 1333 aaKnown RBP15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Sart1Q9Z315 806 aaKnown RBP15.07■□□□□ 0
Trim23-201ENSMUST00000022225 AknaQ80VW7 1404 aa15.07■□□□□ 0
Trim23-201ENSMUST00000022225 AatkQ80YE4 1365 aa15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Med14A2ABV5 1459 aaKnown RBP15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Rangap1P46061 589 aaKnown RBP15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Gtpbp4Q99ME9 634 aaKnown RBP15.07■□□□□ 0
Trim23-201ENSMUST00000022225 MvpQ9EQK5 861 aa15.07■□□□□ 0
Trim23-201ENSMUST00000022225 Trim27Q62158 513 aa15.06■□□□□ 0
Trim23-201ENSMUST00000022225 Nucb1Q02819 459 aaKnown RBP15.05■□□□□ 0
Trim23-201ENSMUST00000022225 Sass6Q80UK7 654 aa15.05■□□□□ 0
Trim23-201ENSMUST00000022225 SrrtQ99MR6 875 aaKnown RBP15.05■□□□□ 0
Trim23-201ENSMUST00000022225 Gm45015A0A140LII9 184 aa15.05■□□□□ -0
Trim23-201ENSMUST00000022225 Gm18336A0A140LIU8 765 aa15.05■□□□□ -0
Trim23-201ENSMUST00000022225 Cgnl1Q6AW69 1298 aa15.05■□□□□ -0
Trim23-201ENSMUST00000022225 Pik3r4Q8VD65 1358 aa15.05■□□□□ -0
Trim23-201ENSMUST00000022225 Nxf2Q4ZGD8 691 aa15.04■□□□□ -0
Trim23-201ENSMUST00000022225 CtifQ6PEE2 600 aaKnown RBP15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Aldh1l1Q8R0Y6 902 aa15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Chmp4bQ9D8B3 224 aaKnown RBP15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Pbrm1Q8BSQ9 1634 aaKnown RBP15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Ankrd44B2RXR6 993 aa15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Erich6D3Z6S9 713 aa15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Fam184aE9PW83 1143 aa15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Aldh8a1Q8BH00 487 aa15.04■□□□□ -0
Trim23-201ENSMUST00000022225 Arhgap5P97393 1501 aa15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Pdia3P27773 505 aaKnown RBP15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Adcy5P84309 1262 aa15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Q3UPC7 1272 aa15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Myo3aQ8K3H5 1613 aa15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Fancd2Q80V62 1450 aa15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Ino80Q6ZPV2 1559 aa15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Uhrf1bp1B2KF50 1429 aa15.03■□□□□ -0
Trim23-201ENSMUST00000022225 Sh3bp1P55194 680 aa15.02■□□□□ -0
Trim23-201ENSMUST00000022225 Swt1Q9DBQ9 907 aa15.02■□□□□ -0
Trim23-201ENSMUST00000022225 Pdcd11Q6NS46 1862 aaKnown RBP15.02■□□□□ -0
Trim23-201ENSMUST00000022225 EzrP26040 586 aaKnown RBP15.02■□□□□ -0
Trim23-201ENSMUST00000022225 DnmbpQ6TXD4 1580 aa15.02□□□□□ -0.01
Trim23-201ENSMUST00000022225 Ciz1Q8VEH2 845 aa15.02□□□□□ -0.01
Trim23-201ENSMUST00000022225 Cdk5rap2Q8K389 1822 aa15.02□□□□□ -0.01
Trim23-201ENSMUST00000022225 ShprhQ7TPQ3 1674 aa15.02□□□□□ -0.01
Trim23-201ENSMUST00000022225 Nsd3Q6P2L6 1439 aa15.02□□□□□ -0.01
Trim23-201ENSMUST00000022225 Vwa3bJ9JI28 736 aa15.01□□□□□ -0.01
Trim23-201ENSMUST00000022225 Fan1Q69ZT1 1020 aa15.01□□□□□ -0.01
Trim23-201ENSMUST00000022225 Mrps27Q8BK72 415 aaKnown RBP15.01□□□□□ -0.01
Trim23-201ENSMUST00000022225 Ehbp1l1Q99MS7 1716 aa15.01□□□□□ -0.01
Trim23-201ENSMUST00000022225 Kif1bQ60575 1816 aaKnown RBP15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Plcd3Q8K2J0 785 aa15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Srpk2O54781 681 aaKnown RBP15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Trim30aP15533 496 aa15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Nucb2P81117 420 aa15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Plekhm2Q80TQ5 1018 aa15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Dnmt1P13864 1620 aaKnown RBP15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Rnf17Q99MV7 1640 aa15□□□□□ -0.01
Trim23-201ENSMUST00000022225 Kcnj4P52189 445 aa14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 Cavin4A2AMM0 362 aa14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 Kcnf1Q7TSH7 493 aa14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 Atp2b2Q9R0K7 1198 aa14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 Usp54Q8BL06 1588 aaKnown RBP14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 Kiaa0754Q69ZZ9 979 aa14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 Tmco5bQ80X59 307 aa14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 Gcc1Q9D4H2 778 aa14.99□□□□□ -0.01
Trim23-201ENSMUST00000022225 PaskQ8CEE6 1383 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Prdm16A2A935 1275 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Eif4g2Q62448 906 aaKnown RBP14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 InsrP15208 1372 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Zkscan16A2ALW2 728 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 NexnQ7TPW1 607 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Cdc42bpbQ7TT50 1713 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Znf541Q0GGX2 1363 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Rnf123Q5XPI3 1314 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Rims1Q99NE5 1463 aa14.98□□□□□ -0.01
Trim23-201ENSMUST00000022225 Kiaa0556Q8C753 1610 aa14.97□□□□□ -0.01
Trim23-201ENSMUST00000022225 Mcm2P97310 904 aa14.97□□□□□ -0.01
Trim23-201ENSMUST00000022225 Prdm4Q80V63 803 aa14.97□□□□□ -0.01
Trim23-201ENSMUST00000022225 Oxsr1Q6P9R2 527 aa14.97□□□□□ -0.01
Trim23-201ENSMUST00000022225 Adam1bQ8R534 806 aa14.97□□□□□ -0.01
Trim23-201ENSMUST00000022225 Gm973E9Q295 1059 aa14.96□□□□□ -0.01
Trim23-201ENSMUST00000022225 Zfp51Q3U4L8 781 aa14.96□□□□□ -0.01
Trim23-201ENSMUST00000022225 Fez2Q6TYB5 348 aa14.96□□□□□ -0.01
Trim23-201ENSMUST00000022225 Nol11Q8BJW5 723 aaKnown RBP14.96□□□□□ -0.01
Trim23-201ENSMUST00000022225 FanclQ9CR14 375 aa14.96□□□□□ -0.01
Trim23-201ENSMUST00000022225 Cc2d1aQ8K1A6 943 aa14.96□□□□□ -0.01
Trim23-201ENSMUST00000022225 Gpatch11Q3UFS4 262 aa14.95□□□□□ -0.02
Trim23-201ENSMUST00000022225 Sipa1l1Q8C0T5 1782 aa14.95□□□□□ -0.02
Trim23-201ENSMUST00000022225 Chmp4cQ9D7F7 232 aa14.95□□□□□ -0.02
Trim23-201ENSMUST00000022225 Tbc1d8Q9Z1A9 1134 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms