RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TBC1D31Q96DN5 1066 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 TMA16Q96EY4 203 aaKnown RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 C1orf74Q96LT6 269 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 DDX50Q9BQ39 737 aaKnown RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 OSBPL2Q9H1P3 480 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 DHX35Q9H5Z1 703 aaKnown RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 POLR1BQ9H9Y6 1135 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 PCDH18Q9HCL0 1135 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 LZTFL1Q9NQ48 299 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 OR12D3Q9UGF7 316 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 MFHAS1Q9Y4C4 1052 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 ENTPD2Q9Y5L3 495 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 APCP25054 2843 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 POLQO75417 2590 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 DRGXA6NNA5 263 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 RNF103O00237 685 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 EEF2KO00418 725 aaKnown RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 KLK10O43240 276 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 SPOPO43791 374 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 NRDCO43847 1150 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 USP12O75317 370 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 CSO75390 466 aaKnown RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 PALMO75781 387 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 FTCDO95954 541 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 KRT1P04264 644 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 CKMT1AP12532 417 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 TNNT1P13805 278 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 VAV1P15498 845 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 DGKAP23743 735 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 TPI1P60174 286 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 E2F1Q01094 437 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 MMRN1Q13201 1228 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 MTA1Q13330 715 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 CDH18Q13634 790 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 DPYSQ14117 519 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 DPYSL3Q14195 570 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 DPYSL2Q16555 572 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 ISXQ2M1V0 245 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 MPP7Q5T2T1 576 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 ERMARDQ5T6L9 678 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 TTC39BQ5VTQ0 682 aaPredicted RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 AGBL4Q5VU57 503 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 RWDD4Q6NW29 188 aaKnown RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 LRRC31Q6UY01 552 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 RFX8Q6ZV50 586 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 POLNQ7Z5Q5 900 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 ADAT2Q7Z6V5 191 aaKnown RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 DAAM2Q86T65 1068 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 PSTKQ8IV42 348 aaKnown RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 REXO1L1PQ8IX06 675 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 SLC22A18ASQ8N1D0 253 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 C17orf53Q8N3J3 647 aaPredicted RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 OXR1Q8N573 874 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 NPWQ8N729 165 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 KDM1BQ8NB78 822 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 NETO2Q8NC67 525 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 RAPGEF5Q92565 580 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 SLC46A1Q96NT5 459 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 EPAS1Q99814 870 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 NCAPGQ9BPX3 1015 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 IRX2Q9BZI1 471 aaPredicted RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 TSGA10Q9BZW7 698 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 ZYG11BQ9C0D3 744 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 NDFIP2Q9NV92 336 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 TMEM51Q9NW97 253 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 CWC15Q9P013 229 aaKnown RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 ANKMY1Q9P2S6 941 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 PPARGC1AQ9UBK2 798 aaKnown RBP7.53□□□□□ -1.2
PHGDH-225ENST00000641720 LCMT1Q9UIC8 334 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 GUCA1BQ9UMX6 200 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 CA5BQ9Y2D0 317 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 ALG6Q9Y672 507 aa7.53□□□□□ -1.2
PHGDH-225ENST00000641720 ESPL1Q14674 2120 aa7.52□□□□□ -1.2
PHGDH-225ENST00000641720 TNRC6AQ8NDV7 1962 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 TYW5A2RUC4 315 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 FAM47DPA6NHR8 397 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 C3orf70A6NLC5 250 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 TTC34A8MYJ7 566 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 PSTPIP1O43586 416 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 PLRG1O43660 514 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 CLDN11O75508 207 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 PIAS2O75928 621 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 GP1BAP07359 652 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 RHOCP08134 193 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 RHOQP17081 205 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 WT1P19544 449 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 TGM2P21980 687 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 MZF1P28698 734 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 EPHB2P29323 1055 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 CSKP41240 450 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 SLC1A1P43005 524 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 ARRB1P49407 418 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 NAP1L1P55209 391 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 CDH4P55283 916 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 CDH6P55285 790 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 KRT81Q14533 505 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 E2F5Q15329 346 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 HADHQ16836 314 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 BOLA3Q53S33 107 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms