RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GRID2O43424 1007 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 PRAMEF11O60813 436 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 KPNA1P52294 538 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 SLC34A1Q06495 639 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 C6orf163Q5TEZ5 329 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 SEL1L3Q68CR1 1132 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 PTAR1Q7Z6K3 402 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 CILP2Q8IUL8 1156 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 NPAS4Q8IUM7 802 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 FAM126BQ8IXS8 530 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 PNPLA1Q8N8W4 532 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 DTX3LQ8TDB6 740 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 C2orf15Q8WU43 125 aaKnown RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 BCL7CQ8WUZ0 217 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 SEPT8Q92599 483 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 SEMA3CQ99985 751 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 CFHR5Q9BXR6 569 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 WDR55Q9H6Y2 383 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 GBF1Q92538 1859 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 CCL22O00626 93 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 MUSKO15146 869 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 SLC7A4O43246 635 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 COX4I1P13073 169 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 PRDX6P30041 224 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 ARSDP51689 593 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 CLCN5P51795 746 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 KPNA2P52292 529 aaKnown RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 ACTR3P61158 418 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 ASPHQ12797 758 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 KLF10Q13118 480 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 CSHL1Q14406 222 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 RALGPS1Q5JS13 557 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 TMCO4Q5TGY1 634 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 GALNT7Q86SF2 657 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 SPNS2Q8IVW8 549 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 LGI2Q8N0V4 545 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 TXNDC5Q8NBS9 432 aaKnown RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 PDCD6IPQ8WUM4 868 aaKnown RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 NRG4Q8WWG1 115 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 HDAC10Q969S8 669 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 NAF1Q96HR8 494 aaKnown RBP17.19■□□□□ 0.34
PHGDH-211ENST00000641213 TMEM175Q9BSA9 504 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 MFSD1Q9H3U5 465 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 CREBZFQ9NS37 354 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 KCTD3Q9Y597 815 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 TANC1Q9C0D5 1861 aa17.19■□□□□ 0.34
PHGDH-211ENST00000641213 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 LOC100653049A0A140TA62 436 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 TBKBP1A7MCY6 615 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 NEMP1O14524 444 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 LDB2O43679 373 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 KRT34O76011 436 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 C5orf22Q49AR2 442 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 FRMD7Q6ZUT3 714 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-211ENST00000641213 CFAP52Q8N1V2 620 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 OR6P1Q8NGX9 317 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 SHKBP1Q8TBC3 707 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 SGF29Q96ES7 293 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 PPP1R36Q96LQ0 422 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 TTLL2Q9BWV7 592 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 POLR1EQ9GZS1 481 aaKnown RBP17.18■□□□□ 0.34
PHGDH-211ENST00000641213 PDFQ9HBH1 243 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 VTI1BQ9UEU0 232 aa17.18■□□□□ 0.34
PHGDH-211ENST00000641213 ANAPC1Q9H1A4 1944 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 F5H5T6 163 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 ADAM12O43184 909 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 NPHS1O60500 1241 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 EPHA3P29320 983 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 SLC6A4P31645 630 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 VHLP40337 213 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 MTA1Q13330 715 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 SLC14A2Q15849 920 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 FAM83EQ2M2I3 478 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 LSM12Q3MHD2 195 aaKnown RBP17.17■□□□□ 0.34
PHGDH-211ENST00000641213 TECRLQ5HYJ1 363 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 C1orf146Q5VVC0 180 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 MYLK4Q86YV6 388 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-211ENST00000641213 CCNYL1Q8N7R7 359 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 OSBPL1AQ9BXW6 950 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 MRPL9Q9BYD2 267 aaKnown RBP17.17■□□□□ 0.34
PHGDH-211ENST00000641213 NUF2Q9BZD4 464 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 POMKQ9H5K3 350 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-211ENST00000641213 SLCO1B7G3V0H7 640 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 HOXA2O43364 376 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 ZMPSTE24O75844 475 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 S1PR4O95977 384 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 ATP5F1P24539 256 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-211ENST00000641213 DNAJB13P59910 316 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 PRAMEP78395 509 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 PEX6Q13608 980 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 ZNF235Q14590 738 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 DEFB115Q30KQ5 88 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 HECTD2Q5U5R9 776 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 LDB1Q86U70 411 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-211ENST00000641213 MAB21L3Q8N8X9 362 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 FBXO22Q8NEZ5 403 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms