RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 PRR23BQ6ZRT6 265 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 DSG4Q86SJ6 1040 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 LRRC49Q8IUZ0 686 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 PAF1Q8N7H5 531 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 FAM71DQ8N9W8 422 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 GLIS1Q8NBF1 620 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 TMIEQ8NEW7 156 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 CCDC110Q8TBZ0 833 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 NSMCE1Q8WV22 266 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 TRIM44Q96DX7 344 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-222ENST00000640634 NUDCD1Q96RS6 583 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 RBM15Q96T37 977 aaKnown RBP eCLIP11.05□□□□□ -0.64
SCARB2-222ENST00000640634 OMDQ99983 421 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 GPR174Q9BXC1 333 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 C6orf106Q9H6K1 298 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-222ENST00000640634 FBRSQ9HAH7 460 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 USP29Q9HBJ7 922 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 SCUBE2Q9NQ36 999 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 UBP1Q9NZI7 540 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 ATP8A1Q9Y2Q0 1164 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 HCN4Q9Y3Q4 1203 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 PCDHGA2Q9Y5H1 932 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 PLXND1Q9Y4D7 1925 aa11.05□□□□□ -0.64
SCARB2-222ENST00000640634 ZFHX2Q9C0A1 2572 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-222ENST00000640634 ATXN2Q99700 1313 aaKnown RBP11.05□□□□□ -0.64
SCARB2-222ENST00000640634 CCDC163A0A0D9SF12 145 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 C16orf96A6NNT2 1141 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 C1QTNF3-AMACRE9PGA6 284 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 TRAFD1O14545 582 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 MT-CYBP00156 380 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PDHA1P08559 390 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ETS1P14921 441 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 CD86P42081 329 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 KCNJ1P48048 391 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PTPN5P54829 565 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ADPRHP54922 357 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PPP2CBP62714 309 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PPP2CAP67775 309 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 OLIG2Q13516 323 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 TTC31Q49AM3 519 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 USP39Q53GS9 565 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 KDELC2Q7Z4H8 507 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PRPF39Q86UA1 669 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 SLC41A1Q8IVJ1 513 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 RASGEF1CQ8N431 466 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PRELID2Q8N945 189 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PDCD6IPQ8WUM4 868 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 FATE1Q969F0 183 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 NAPGQ99747 312 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 POLR1EQ9GZS1 481 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 WSB2Q9NYS7 404 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 TPX2Q9ULW0 747 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 A8MX80 341 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 NEBLO76041 1014 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 IGLV3-19P01714 112 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ADRB3P13945 408 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ITGB7P26010 798 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 CD6P30203 668 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 SKOR1P84550 965 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 RPL6Q02878 288 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ZBTB16Q05516 673 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 NSUN2Q08J23 767 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 CBLBQ13191 982 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 XRCC4Q13426 336 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 SIM2Q14190 667 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 NR6A1Q15406 480 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 OASLQ15646 514 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PLK5Q496M5 336 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 TEX44Q53QW1 395 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ZNF805Q5CZA5 627 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 SYCP2LQ5T4T6 812 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 FAXCQ5TGI0 409 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 PAPD7Q5XG87 772 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ALG1LQ6GMV1 187 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 TTC27Q6P3X3 843 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 KDM7AQ6ZMT4 941 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 ERN2Q76MJ5 926 aaKnown RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 CEP68Q76N32 757 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 CDKL3Q8IVW4 592 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 OR14C36Q8NHC7 312 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 FAM131CQ96AQ9 280 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 OXNAD1Q96HP4 312 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 TEKT5Q96M29 485 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 FAM126AQ9BYI3 521 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 CASS4Q9NQ75 786 aa11.04□□□□□ -0.64
SCARB2-222ENST00000640634 KLHL8Q9P2G9 620 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-222ENST00000640634 BCLAF3A2AJT9 711 aaKnown RBP11.03□□□□□ -0.64
SCARB2-222ENST00000640634 CTAGE9A4FU28 777 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 GOLGA8CPA6NN73 597 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 HACD1B0YJ81 288 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 ZNF217O75362 1048 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 ZSCAN5DPP0CG00 497 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 TIMP2P16035 220 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 MAOBP27338 520 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 CSNK1DP48730 415 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 AP1S1P61966 158 aa11.03□□□□□ -0.64
SCARB2-222ENST00000640634 ETF1P62495 437 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms