RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 NUP85Q9BW27 656 aa19.14■□□□□ 0.65
CLN6-221ENST00000637494 USP29Q9HBJ7 922 aa19.14■□□□□ 0.65
CLN6-221ENST00000637494 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.14■□□□□ 0.65
CLN6-221ENST00000637494 NCKIPSDQ9NZQ3 722 aa19.14■□□□□ 0.65
CLN6-221ENST00000637494 CSNK1G3Q9Y6M4 447 aa19.14■□□□□ 0.65
CLN6-221ENST00000637494 TSPAN11A1L157 253 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 MYO1FO00160 1098 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 RIOK3O14730 519 aaKnown RBP19.13■□□□□ 0.65
CLN6-221ENST00000637494 SPINT1O43278 529 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 TPM1P09493 284 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 JUNDP17535 347 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 NSUN2Q08J23 767 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLN6-221ENST00000637494 DPYSQ14117 519 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 KRT81Q14533 505 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 ZNF235Q14590 738 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 LRRC14Q15048 493 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 TSR1Q2NL82 804 aaKnown RBP19.13■□□□□ 0.65
CLN6-221ENST00000637494 CYP4V2Q6ZWL3 525 aaPredicted RBP19.13■□□□□ 0.65
CLN6-221ENST00000637494 MARCH9Q86YJ5 346 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 ARHGAP12Q8IWW6 846 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 NIPA2Q8N8Q9 360 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 TSEN2Q8NCE0 465 aaKnown RBP19.13■□□□□ 0.65
CLN6-221ENST00000637494 VOPP1Q96AW1 172 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 CENPTQ96BT3 561 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 NXPE2Q96DL1 559 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 PCDH12Q9NPG4 1184 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 SPASTQ9UBP0 616 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 DKK4Q9UBT3 224 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 SEPT3Q9UH03 358 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 USP24Q9UPU5 2620 aa19.13■□□□□ 0.65
CLN6-221ENST00000637494 PLXNB3Q9ULL4 1909 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 A0A087X0T9 212 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 TMEM110-MUSTN1A8MSY1 372 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 AQP9O43315 295 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 LZTS3O60299 673 aaPredicted RBP19.12■□□□□ 0.65
CLN6-221ENST00000637494 FAM228BP0C875 321 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 CKMT1AP12532 417 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 NFKBIAP25963 317 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 CASP14P31944 242 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 IGFALSP35858 605 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 HSPA9P38646 679 aaKnown RBP19.12■□□□□ 0.65
CLN6-221ENST00000637494 AP1S1P61966 158 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 CYP4F3Q08477 520 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 TRIM14Q14142 442 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 LBRQ14739 615 aaKnown RBP19.12■□□□□ 0.65
CLN6-221ENST00000637494 POLNQ7Z5Q5 900 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 CAMK1DQ8IU85 385 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 NPWQ8N729 165 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 ZNF548Q8NEK5 533 aaPredicted RBP19.12■□□□□ 0.65
CLN6-221ENST00000637494 ATL2Q8NHH9 583 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 LMX1AQ8TE12 382 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 GLMNQ92990 594 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 APOLD1Q96LR9 279 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 IL12RB2Q99665 862 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 SLC13A1Q9BZW2 595 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 APOBEC3BQ9UH17 382 aaKnown RBP19.12■□□□□ 0.65
CLN6-221ENST00000637494 ATP8A1Q9Y2Q0 1164 aa19.12■□□□□ 0.65
CLN6-221ENST00000637494 FRYQ5TBA9 3013 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.11■□□□□ 0.65
CLN6-221ENST00000637494 CAPNS1P04632 268 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 GYPCP04921 128 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 CYP1A2P05177 515 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 RARAP10276 462 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 ITIH2P19823 946 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 AMPD1P23109 780 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 IL1R2P27930 398 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 HTR1BP28222 390 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 EIF4A3P38919 411 aaKnown RBP19.11■□□□□ 0.65
CLN6-221ENST00000637494 SCNN1BP51168 640 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 BLKP51451 505 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 TARDBPQ13148 414 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLN6-221ENST00000637494 CAMK2BQ13554 666 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 FAXCQ5TGI0 409 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 ZCCHC8Q6NZY4 707 aaKnown RBP19.11■□□□□ 0.65
CLN6-221ENST00000637494 MACC1Q6ZN28 852 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 FAM181AQ8N9Y4 354 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 TP53I13Q8NBR0 393 aaPredicted RBP19.11■□□□□ 0.65
CLN6-221ENST00000637494 CSPG4P5Q96PW8 444 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 PSKH2Q96QS6 385 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 XPO4Q9C0E2 1151 aaKnown RBP19.11■□□□□ 0.65
CLN6-221ENST00000637494 ABCG4Q9H172 646 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 DEF6Q9H4E7 631 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 ZNHIT6Q9NWK9 470 aaKnown RBP19.11■□□□□ 0.65
CLN6-221ENST00000637494 LCMT1Q9UIC8 334 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 CLCA2Q9UQC9 943 aa19.11■□□□□ 0.65
CLN6-221ENST00000637494 A0A1W2PQ67 120 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 K7ESM1 405 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 TAF4O00268 1085 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 BUB1BO60566 1050 aaPredicted RBP19.1■□□□□ 0.65
CLN6-221ENST00000637494 NEBLO76041 1014 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 C6P13671 934 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 LIG3P49916 1009 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 PEX5P50542 639 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 CDH6P55285 790 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 IRF4Q15306 451 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 ARHGAP36Q6ZRI8 547 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 CACTIN-AS1Q8N1I8 211 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 ATPAF2Q8N5M1 289 aa19.1■□□□□ 0.65
CLN6-221ENST00000637494 ZNF564Q8TBZ8 553 aaPredicted RBP19.1■□□□□ 0.65
CLN6-221ENST00000637494 CTNNBL1Q8WYA6 563 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms