RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 CXorf40AQ8TE69 158 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 NAP1L5Q96NT1 182 aaPredicted RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 TRIM7Q9C029 511 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 ISCUQ9H1K1 167 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 EVA1BQ9NVM1 165 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 IPO11Q9UI26 975 aaKnown RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 AK5Q9Y6K8 562 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 ASXL3Q9C0F0 2248 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 ARHGAP42A6NI28 874 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 TMEM110-MUSTN1A8MSY1 372 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 LMO7DNF2Z398 122 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 GCATO75600 419 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 RNF8O76064 485 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
CTSD-210ENST00000637381 MYF5P13349 255 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 MIPP30301 263 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
CTSD-210ENST00000637381 SEMG2Q02383 582 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 RFTN1Q14699 578 aaPredicted RBP12.85□□□□□ -0.35
CTSD-210ENST00000637381 ACAP1Q15027 740 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 IQCB1Q15051 598 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 ASIC2Q16515 512 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 KLHL40Q2TBA0 621 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 FILIP1LQ4L180 1135 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 KDM7AQ6ZMT4 941 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 MACC1Q6ZN28 852 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 RFX8Q6ZV50 586 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 FGF11Q92914 225 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 GRAMD1AQ96CP6 724 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 ECHDC3Q96DC8 303 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 EXOC2Q96KP1 924 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
CTSD-210ENST00000637381 NCAPGQ9BPX3 1015 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
CTSD-210ENST00000637381 DHX35Q9H5Z1 703 aaKnown RBP12.85□□□□□ -0.35
CTSD-210ENST00000637381 PCDH12Q9NPG4 1184 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 GPATCH2LQ9NWQ4 482 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 SPASTQ9UBP0 616 aa12.85□□□□□ -0.35
CTSD-210ENST00000637381 EEF2KO00418 725 aaKnown RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 BRINP1O60477 761 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 LRCH4O75427 683 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 PIGNO95427 931 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 MYBL1P10243 752 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 ERCC2P18074 760 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 PCK1P35558 622 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 ACTN2P35609 894 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 MMP12P39900 470 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 RGRP47804 291 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 ZNF165P49910 485 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 THOP1P52888 689 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 IL10RBQ08334 325 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 DPYSQ14117 519 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 LRRC14Q15048 493 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 WSCD2Q2TBF2 565 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 TBC1D25Q3MII6 688 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 LVRNQ6Q4G3 990 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 IGF2-ASQ6U949 168 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 SRLQ86TD4 932 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 ZSWIM9Q86XI8 627 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 CAMK1DQ8IU85 385 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 PHACTR4Q8IZ21 702 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 SDR16C5Q8N3Y7 309 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 TPCN2Q8NHX9 752 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 IFI44Q8TCB0 444 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 LMX1AQ8TE12 382 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 WRAP53Q9BUR4 548 aaKnown RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 LRRC61Q9BV99 259 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 CLPBQ9H078 707 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 TCEAL2Q9H3H9 227 aaPredicted RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 APOBEC3BQ9UH17 382 aaKnown RBP12.84□□□□□ -0.35
CTSD-210ENST00000637381 PCSK1NQ9UHG2 260 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 PCDHB1Q9Y5F3 818 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 SCINQ9Y6U3 715 aa12.84□□□□□ -0.35
CTSD-210ENST00000637381 SHROOM3Q8TF72 1996 aa12.83□□□□□ -0.35
CTSD-210ENST00000637381 ATRXP46100 2492 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 TRAFD1O14545 582 aaPredicted RBP12.83□□□□□ -0.36
CTSD-210ENST00000637381 YY2O15391 372 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 PRPSAP2O60256 369 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 PALMO75781 387 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 C6P13671 934 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 TGM2P21980 687 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 ITPKBP27987 946 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 PBX1P40424 430 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 ABCG1P45844 678 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 LSSP48449 732 aa12.83□□□□□ -0.36
CTSD-210ENST00000637381 LIG3P49916 1009 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms