RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 EPS15L1Q9UBC2 864 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 RIMKLBQ9ULI2 386 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 RPL26L1Q9UNX3 145 aaKnown RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 ZCWPW2A0A1B0GU75 182 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 FAM86C2PA6NEL3 165 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 POC1B-GALNT4F8VUJ3 575 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 MT-CO1P00395 513 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 SRPRAP08240 638 aaKnown RBP15.48■□□□□ 0.07
CLN6-219ENST00000637329 ARSAP15289 507 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 PSMC3P17980 439 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 POLR2EP19388 210 aaKnown RBP15.48■□□□□ 0.07
CLN6-219ENST00000637329 CNTFP26441 200 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 CHRNA4P43681 627 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 GRIA4P48058 902 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 SNRPD1P62314 119 aaKnown RBP15.48■□□□□ 0.07
CLN6-219ENST00000637329 MGAT5Q09328 741 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 POU6F1Q14863 301 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 EFTUD2Q15029 972 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLN6-219ENST00000637329 EMC10Q5UCC4 262 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 KCTD16Q68DU8 428 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 PDPK2PQ6A1A2 396 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 TRIM68Q6AZZ1 485 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 KIAA0930Q6ICG6 404 aaPredicted RBP15.48■□□□□ 0.07
CLN6-219ENST00000637329 ARFGAP2Q8N6H7 521 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 KDM1BQ8NB78 822 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 DCAKDQ8WVC6 231 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 SUSD6Q92537 303 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 KCNH6Q9H252 994 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 HPS4Q9NQG7 708 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 BCCIPQ9P287 314 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLN6-219ENST00000637329 CD207Q9UJ71 328 aa15.48■□□□□ 0.07
CLN6-219ENST00000637329 MUC22E2RYF6 1773 aaPredicted RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 IQANK1A0A1B0GTG1 560 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 SMAD6O43541 496 aaKnown RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 GJB3O75712 270 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 ATP5BP06576 529 aaKnown RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 CISD3P0C7P0 127 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 NR1D1P20393 614 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 SERPINB9P50453 376 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 MSLNQ13421 630 aaPredicted RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 TMED2Q15363 201 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 GAB4Q2WGN9 574 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 PREPLQ4J6C6 727 aaPredicted RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 GRAMD4Q6IC98 578 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 TRMT10BQ6PF06 316 aaKnown RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 KDM7AQ6ZMT4 941 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 RASSF3Q86WH2 238 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 SLC25A41Q8N5S1 370 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 GABPB2Q8TAK5 448 aaPredicted RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 HLA-CQ95604 372 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 MYO19Q96H55 970 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 TRIM56Q9BRZ2 755 aaKnown RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 EBF3Q9H4W6 596 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 ATP13A3Q9H7F0 1226 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 TREX1Q9NSU2 369 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 ZFATQ9P243 1243 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 CTNNAL1Q9UBT7 734 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 NOVA2Q9UNW9 492 aaKnown RBP15.47■□□□□ 0.07
CLN6-219ENST00000637329 SLC8A2Q9UPR5 921 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 RAI2Q9Y5P3 530 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 DOCK8Q8NF50 2099 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 MYLKQ15746 1914 aa15.47■□□□□ 0.07
CLN6-219ENST00000637329 A0A1W2PQ67 120 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 TTC24A2A3L6 582 aaPredicted RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 MROH6A6NGR9 719 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 K7ERQ8 282 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 FZD6O60353 706 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 TULP3O75386 442 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 ZNF821O75541 412 aaPredicted RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 DLDP09622 509 aaKnown RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 TPH1P17752 444 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 SERPINA4P29622 427 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 NNMTP40261 264 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 CTSOP43234 321 aaPredicted RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 STK19P49842 368 aaPredicted RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 MAGOHP61326 146 aaKnown RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 BCL2L1Q07817 233 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 ILF2Q12905 390 aaKnown RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 TRAF2Q12933 501 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 RUNX3Q13761 415 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 SEPT6Q14141 434 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 GEN1Q17RS7 908 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 ATXN7L2Q5T6C5 722 aaPredicted RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 LGSNQ5TDP6 509 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 EP400NLQ6ZTU2 488 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 KCNMB4Q86W47 210 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 CTAGE3PQ8IX95 158 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 BRSK1Q8TDC3 778 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 ZBTB9Q96C00 473 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 MTBPQ96DY7 904 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 SRPK1Q96SB4 655 aaKnown RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 CPEB1Q9BZB8 566 aaKnown RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 TM6SF2Q9BZW4 377 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 CNOT10Q9H9A5 744 aaKnown RBP15.46■□□□□ 0.07
CLN6-219ENST00000637329 CHRAC1Q9NRG0 131 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 HACD3Q9P035 362 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 DEC1Q9P2X7 70 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 ERVW-1Q9UQF0 538 aa15.46■□□□□ 0.07
CLN6-219ENST00000637329 USP15Q9Y4E8 981 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms