RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PHPT1Q9NRX4 125 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 THAP1Q9NVV9 213 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TRPS1Q9UHF7 1281 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ASF1AQ9Y294 204 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 GSC2O15499 205 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 SGPL1O95470 568 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 FGBP02675 491 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 RLN1P04808 185 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 ANPEPP15144 967 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF37AP17032 561 aaPredicted RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 GP5P40197 560 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 CEBPGP53567 150 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 CDH13P55290 713 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 SPIBQ01892 262 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 BDH1Q02338 343 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 SP3Q02447 781 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 MAPK7Q13164 816 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 NEDD8Q15843 81 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 C8orf59Q8N0T1 100 aaPredicted RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 MEIOBQ8N635 442 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 ACOT12Q8WYK0 555 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 SEMA4DQ92854 862 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 GRIP2Q9C0E4 1043 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 POPDC2Q9HBU9 364 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 PHF24Q9UPV7 400 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 PNPLA6Q8IY17 1366 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 SNAP23O00161 211 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 AREL1O15033 823 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 CLOCKO15516 846 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 OR10H3O60404 316 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 TNFRSF21O75509 655 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 NTRK1P04629 796 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 HSD3B1P14060 373 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 INSRRP14616 1297 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 CYP2C18P33260 490 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 IDH2P48735 452 aaKnown RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 QPRTQ15274 297 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 LY6KQ17RY6 165 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 FAM153CQ494X1 144 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 RFTN2Q52LD8 501 aaPredicted RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 POMZP3Q6PJE2 187 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 USP50Q70EL3 339 aaPredicted RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 PAFAH2Q99487 392 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 CHP1Q99653 195 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 CHID1Q9BWS9 393 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 JMJD4Q9H9V9 463 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 AGO4Q9HCK5 861 aaKnown RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 POLMQ9NP87 494 aaPredicted RBP5.59□□□□□ -1.52
SCN1A-209ENST00000635750 NUDT5Q9UKK9 219 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 DMTF1Q9Y222 760 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM5Q9Y2B1 443 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 EFR3BQ9Y2G0 817 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 KCNE2Q9Y6J6 123 aa5.59□□□□□ -1.52
SCN1A-209ENST00000635750 FAM172BPA6NC97 362 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 TTC34A8MYJ7 566 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 RGS10O43665 173 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 NUAK1O60285 661 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 CLEC3AO75596 197 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 DBIP07108 87 aaKnown RBP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 CXCL8P10145 99 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 KCNJ5P48544 419 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 HERVK_113P62684 666 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 SP2Q02086 613 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 USP4Q13107 963 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 PCBP1Q15365 356 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 TMPRSS11AQ6ZMR5 421 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 APTXQ7Z2E3 356 aaKnown RBP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 GJD3Q8N144 294 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 PPP3R2Q96LZ3 170 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 AIF1LQ9BQI0 150 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 ZSWIM1Q9BR11 485 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 THAP2Q9H0W7 228 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM27Q9HBJ8 222 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 PTPRHQ9HD43 1115 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 PCDHGC3Q9UN70 934 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 MYRFQ9Y2G1 1151 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 GRIP1Q9Y3R0 1128 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 SPHKAPQ2M3C7 1700 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 WDR27A2RRH5 827 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 LRRC72A6NJI9 287 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 SLC33A1O00400 549 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 CHST10O43529 356 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 PLOD3O60568 738 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 GLUD1P00367 558 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 SERPINA3P01011 423 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 FDPSP14324 419 aaKnown RBP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 AGXTP21549 392 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 ATP5A1P25705 553 aaKnown RBP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 IST1P53990 364 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 GRSF1Q12849 480 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 ACAP1Q15027 740 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 DEFB115Q30KQ5 88 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 PLPP4Q5VZY2 271 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 DHRSXQ8N5I4 330 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 DCAKDQ8WVC6 231 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 SNRNP27Q8WVK2 155 aaKnown RBP5.58□□□□□ -1.52
SCN1A-209ENST00000635750 MAML3Q96JK9 1138 aa5.58□□□□□ -1.52
SCN1A-209ENST00000635750 RBM12Q9NTZ6 932 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms