RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 STOX1Q6ZVD7 989 aa17.52■□□□□ 0.4
CACNA1A-215ENST00000635727 ERO1BQ86YB8 467 aa17.52■□□□□ 0.4
CACNA1A-215ENST00000635727 C12orf50Q8NA57 414 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-215ENST00000635727 ABHD5Q8WTS1 349 aa17.52■□□□□ 0.4
CACNA1A-215ENST00000635727 WRAP53Q9BUR4 548 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-215ENST00000635727 CASKO14936 926 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 FADS2O95864 444 aaKnown RBP17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 INSRRP14616 1297 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 CAMK1DQ8IU85 385 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 ZNF224Q9NZL3 707 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 GNPTGQ9UJJ9 305 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 GRIP1Q9Y3R0 1128 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 MAT2AP31153 395 aaKnown RBP17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 UQCRC1P31930 480 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 SPIRE1Q08AE8 756 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 AADACL2Q6P093 401 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 LRRC17Q8N6Y2 441 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 ZCCHC10Q8TBK6 192 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 ZNF226Q9NYT6 803 aa17.52■□□□□ 0.39
CACNA1A-215ENST00000635727 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 ZSCAN5CA6NGD5 496 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 TCF4P15884 667 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CDC42P60953 191 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 VLDLRP98155 873 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 ZNF155Q12901 538 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 IKBKEQ14164 716 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 POLNQ7Z5Q5 900 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 ANKS1AQ92625 1134 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 HTRA1Q92743 480 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 ZSCAN5AQ9BUG6 496 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 TDRD1Q9BXT4 1180 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 AHCYL1O43865 530 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 DDNO94850 711 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 F9P00740 461 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 NR0B1P51843 470 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CWF19L1Q69YN2 538 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 NECTIN3Q9NQS3 549 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 FDPSP14324 419 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 ZNF730Q6ZMV8 503 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 SLC34A3Q8N130 599 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CLDN5O00501 218 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CBX6O95503 412 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CHRM5P08912 532 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 GMFBP60983 142 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CPSF6Q16630 551 aaKnown RBP eCLIP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 OR7A2PQ8NGA2 310 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 AARSD1Q9BTE6 412 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 UCKL1Q9NWZ5 548 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 TMCO1Q9UM00 188 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 SLC25A14O95258 325 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 ZSCAN5DPP0CG00 497 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 HDCP19113 662 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 FAM187BQ17R55 369 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 P4HA3Q7Z4N8 544 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CNPY4Q8N129 248 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 SLC47A1Q96FL8 570 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 CKLFQ9UBR5 152 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 A8MU76 341 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 HCN1O60741 890 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 HTR1BP28222 390 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 DCTN2Q13561 401 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 BRD7Q9NPI1 651 aa17.51■□□□□ 0.39
CACNA1A-215ENST00000635727 A0A1B0GTH6 734 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 ADM5C9JUS6 153 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 KLRK1P26718 216 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 ADORA2AP29274 412 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 ZDHHC20Q5W0Z9 365 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 OLFML1Q6UWY5 402 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 ANKS1BQ7Z6G8 1248 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 DEFB106AQ8N104 65 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 CPNE1Q99829 537 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 GTPBP2Q9BX10 602 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 FRMD8Q9BZ67 464 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 NAALADL1Q9UQQ1 740 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 DGKBQ9Y6T7 804 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 ATP6V1G2O95670 118 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 HSD3B1P14060 373 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 BNIP2Q12982 314 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 UBAP2LQ14157 1087 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 SPANXN3Q5MJ09 141 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 SAMD4BQ5PRF9 694 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 IRGCQ6NXR0 463 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 SPESP1Q6UW49 350 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 TMPRSS11BQ86T26 416 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 SETD9Q8NE22 299 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 OR52K1Q8NGK4 314 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 HELQQ8TDG4 1101 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 COQ8BQ96D53 544 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 PTPRTO14522 1441 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 DGKAP23743 735 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 ASMTP46597 345 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 CHN2P52757 468 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 TLR1Q15399 786 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 PUS10Q3MIT2 529 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 GPR107Q5VW38 600 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 TAS1R2Q8TE23 839 aa17.5■□□□□ 0.39
CACNA1A-215ENST00000635727 NELL1Q92832 810 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms