RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CD59P13987 128 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 PRLRP16471 622 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 MAT2AP31153 395 aaKnown RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 CTNNA1P35221 906 aaKnown RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 MMP12P39900 470 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 MAPK8P45983 427 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 PEX5P50542 639 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 CCZ1BP86790 482 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 CCZ1P86791 482 aaPredicted RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 PPIDQ08752 370 aaKnown RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 RALGDSQ12967 914 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 SHBQ15464 509 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 ZNF423Q2M1K9 1284 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 FAM182AQ5T1J6 154 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 TBC1D3GQ6DHY5 549 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 TBC1D3CQ6IPX1 549 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 NAPEPLDQ6IQ20 393 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 NPNTQ6UXI9 565 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 KDM7AQ6ZMT4 941 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 SPOCD1Q6ZMY3 1216 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 GCNT7Q6ZNI0 430 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 SPATS2Q86XZ4 545 aaKnown RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 CAMK1DQ8IU85 385 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 LRRC49Q8IUZ0 686 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 TBC1D3Q8IZP1 549 aaPredicted RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 HCAR2Q8TDS4 363 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 ALG3Q92685 438 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 RAB7BQ96AH8 199 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 ANP32EQ9BTT0 268 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 CINPQ9BW66 212 aaPredicted RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 C1QTNF2Q9BXJ5 285 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 SUV39H2Q9H5I1 410 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 CAAP1Q9H8G2 361 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 TPX2Q9ULW0 747 aaKnown RBP11.22□□□□□ -0.61
DDX41-219ENST00000629036 SNX11Q9Y5W9 270 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 ADGRG1Q9Y653 693 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 CAPN6Q9Y6Q1 641 aa11.22□□□□□ -0.61
DDX41-219ENST00000629036 ARHGEF17Q96PE2 2063 aaPredicted RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 PLXNB3Q9ULL4 1909 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 ASH1LQ9NR48 2969 aaKnown RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 hCG_1818297A0A087WSY0 165 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 H0Y8X5 98 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 SPOPO43791 374 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 FZD6O60353 706 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 HLA-DQB2P05538 268 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 MMP2P08253 660 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 GNSP15586 552 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 CTNNA2P26232 953 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 NUDT1P36639 197 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 NOP2P46087 812 aaKnown RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 MAXP61244 160 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 AP1S1P61966 158 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 TRAF2Q12933 501 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 ZBTB17Q13105 803 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 HNRNPDQ14103 355 aaKnown RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 KIAA1161Q6NSJ0 714 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 DBX2Q6ZNG2 339 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 KANSL1Q7Z3B3 1105 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 ABI3BPQ7Z7G0 1075 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 NT5DC3Q86UY8 548 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 MAP7D3Q8IWC1 876 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 SLC22A18ASQ8N1D0 253 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 RYBPQ8N488 228 aaPredicted RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 CNTD1Q8N815 330 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 ARRDC2Q8TBH0 407 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 KLK6Q92876 244 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 ZNF641Q96N77 438 aaPredicted RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 NUDCD1Q96RS6 583 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 LGMNQ99538 433 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 IL12RB2Q99665 862 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 SCNM1Q9BWG6 230 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 NOD2Q9HC29 1040 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 FZD3Q9NPG1 666 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 PCDH12Q9NPG4 1184 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 DDX56Q9NY93 547 aaKnown RBP11.21□□□□□ -0.61
DDX41-219ENST00000629036 DMTF1Q9Y222 760 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 ANKRD6Q9Y2G4 727 aa11.21□□□□□ -0.61
DDX41-219ENST00000629036 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.62
DDX41-219ENST00000629036 RIOK3O14730 519 aaKnown RBP11.2□□□□□ -0.62
DDX41-219ENST00000629036 MATN3O15232 486 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 TSPAN6O43657 245 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 PRKCGP05129 697 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 ZNF883P0CG24 379 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 KRT10P13645 584 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 CCNCP24863 283 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 CD38P28907 300 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 PTPN7P35236 360 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 HSPA9P38646 679 aaKnown RBP11.2□□□□□ -0.62
DDX41-219ENST00000629036 MMP13P45452 471 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 GSDMDP57764 484 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 NXPH1P58417 271 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 IFI35P80217 286 aaPredicted RBP11.2□□□□□ -0.62
DDX41-219ENST00000629036 NIPAL4Q0D2K0 466 aa11.2□□□□□ -0.62
DDX41-219ENST00000629036 GRM3Q14832 879 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms