RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 OR9I1Q8NGQ6 314 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 KCTD13Q8WZ19 329 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 LRRC39Q96DD0 335 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 NAT9Q9BTE0 207 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 FRMD8Q9BZ67 464 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 MTG2Q9H4K7 406 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 FBRSL1Q9HCM7 1045 aaKnown RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 DNMT3LQ9UJW3 386 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 RNF112Q9ULX5 631 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 FAM159BA6NKW6 160 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 E7ESA3 106 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 MATN3O15232 486 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 ZBTB14O43829 449 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 MAFKO60675 156 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 BMP1P13497 986 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 CD1EP15812 388 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 MZF1P28698 734 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 STX1BP61266 288 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 DEFB103AP81534 67 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 MRPS22P82650 360 aaKnown RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 CDK18Q07002 472 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 NIPAL4Q0D2K0 466 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 RALGDSQ12967 914 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 TIGD7Q6NT04 549 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 CENPIQ92674 756 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 LENG8Q96PV6 779 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 SLC2A13Q96QE2 648 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 CPQQ9Y646 472 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 SLC38A8A6NNN8 435 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 NR5A2O00482 541 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 OR1I1O60431 355 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 RFPL2O75678 378 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 GOT2P00505 430 aaKnown RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 JUNP05412 331 aaKnown RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 LINC00032P0C843 101 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 GLUD2P49448 558 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 TBL3Q12788 808 aaKnown RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 BOP1Q14137 746 aaKnown RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 PRKD1Q15139 912 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 UGP2Q16851 508 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 PLA2G4EQ3MJ16 856 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 TMEM259Q4ZIN3 620 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 MAP3K21Q5TCX8 1036 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 TMCO4Q5TGY1 634 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 RNF43Q68DV7 783 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 SMYD5Q6GMV2 418 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 RAB44Q7Z6P3 723 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 TDRPQ86YL5 185 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 PTGR2Q8N8N7 351 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 GABPB2Q8TAK5 448 aaPredicted RBP7.56□□□□□ -1.2
PKP4-217ENST00000628904 LINC01599Q8WXQ3 324 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 BTN2A3PQ96KV6 586 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 KCNA7Q96RP8 456 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 THEGQ9P2T0 379 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 PCDHB8Q9UN66 801 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 CDYLQ9Y232 598 aa7.56□□□□□ -1.2
PKP4-217ENST00000628904 UBXN8O00124 270 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 AGRPO00253 132 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 GSC2O15499 205 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 SIN3BO75182 1162 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 RASSF9O75901 435 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 DLDP09622 509 aaKnown RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 CALB2P22676 271 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 CRHR1P34998 444 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 NPY2RP49146 381 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 LIMK2P53671 638 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 RAB10P61026 200 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 HSPA14Q0VDF9 509 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 ARHGEF6Q15052 776 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 PPP1R3AQ16821 1122 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 SNX30Q5VWJ9 437 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 GK5Q6ZS86 529 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 DNAJB7Q7Z6W7 309 aaPredicted RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 YTHDF3Q7Z739 585 aaKnown RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 COLGALT2Q8IYK4 626 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 MAPK15Q8TD08 544 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 SORCS1Q8WY21 1168 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 MRPS31Q92665 395 aaKnown RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 RCN3Q96D15 328 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 CFAP97Q9P2B7 532 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 ZDHHC2Q9UIJ5 367 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 FKBPLQ9UIM3 349 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 HEATR9A2RTY3 570 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 CCDC162PA2VCL2 907 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 KRT87PA6NCN2 255 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 KIF3CO14782 793 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 TRIM24O15164 1050 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 NIPSNAP2O75323 286 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 TCEA3O75764 348 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 DNAJC8O75937 253 aaPredicted RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 RGRP47804 291 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 PTDSS1P48651 473 aaKnown RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 SGSHP51688 502 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
PKP4-217ENST00000628904 PCLAFQ15004 111 aa7.55□□□□□ -1.2
PKP4-217ENST00000628904 PAFAH1B3Q15102 231 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms