RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 YBEYP58557 167 aaPredicted RBP20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 IL9RQ01113 521 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 CNTN1Q12860 1018 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 PARP15Q460N3 678 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 AGBL4Q5VU57 503 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 PAPD7Q5XG87 772 aaKnown RBP20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 BBS12Q6ZW61 710 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 ATP11CQ8NB49 1132 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 ARHGEF2Q92974 986 aaKnown RBP20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 HMCESQ96FZ2 354 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 CCDC114Q96M63 670 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 SLC39A8Q9C0K1 460 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 MAGEH1Q9H213 219 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 TOR4AQ9NXH8 423 aa20.24■□□□□ 0.83
R3HCC1-210ENST00000625275 ZZEF1O43149 2961 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 ZFYVE26Q68DK2 2539 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 ASPMQ8IZT6 3477 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 WNT9AO14904 365 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 MAP3K6O95382 1288 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 MT-CO1P00395 513 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 ATXN1LP0C7T5 689 aaKnown RBP20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 ZFXP17010 805 aaPredicted RBP20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 SLC10A2Q12908 348 aaPredicted RBP20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 KLF1Q13351 362 aaPredicted RBP20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 POM121L1PQ3SYA9 428 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 SLC45A4Q5BKX6 768 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 NAPEPLDQ6IQ20 393 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 NPNTQ6UXI9 565 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 COG1Q8WTW3 980 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 ELF4Q99607 663 aaPredicted RBP20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 DTLQ9NZJ0 730 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 SAE1Q9UBE0 346 aaPredicted RBP20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 FARP1Q9Y4F1 1045 aaPredicted RBP20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 HEY1Q9Y5J3 304 aa20.23■□□□□ 0.83
R3HCC1-210ENST00000625275 TCRBV7S2A1N4TA0A589 114 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 DFFAO00273 331 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 CEP104O60308 925 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 TJP3O95049 919 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 PECAM1P16284 738 aaPredicted RBP20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 TGM2P21980 687 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 CASQ1P31415 396 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 NUDT1P36639 197 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 ETFBP38117 255 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 CLCN6P51797 869 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 PRPF39Q86UA1 669 aaKnown RBP20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 TRIM69Q86WT6 500 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 SLC13A5Q86YT5 568 aaPredicted RBP20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 PBKQ96KB5 322 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 SPON2Q9BUD6 331 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 ATP13A1Q9HD20 1204 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 GDF3Q9NR23 364 aa20.22■□□□□ 0.83
R3HCC1-210ENST00000625275 K7ERQ8 282 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 TNFSF14O43557 240 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 DKK1O94907 266 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 CTSLP07711 333 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 TCP1P17987 556 aaKnown RBP20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 GLDCP23378 1020 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 PAPOLAP51003 745 aaKnown RBP20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 GALNT2Q10471 571 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 SERINC3Q13530 473 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 C22orf39Q6P5X5 142 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 OR2A12Q8NGT7 310 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 HAUS1Q96CS2 278 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 DMTF1Q9Y222 760 aa20.21■□□□□ 0.83
R3HCC1-210ENST00000625275 ARHGAP42A6NI28 874 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 APOC4-APOC2K7ER74 178 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 CBX4O00257 560 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 ZNF185O15231 689 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 YKT6O15498 198 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 SMAD6O43541 496 aaKnown RBP20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 APOC2P02655 101 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 PRLRP16471 622 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 MAT2AP31153 395 aaKnown RBP20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 CHRNA3P32297 505 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 NXPH1P58417 271 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 PRAMEF14Q5SWL7 426 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 CCDC181Q5TID7 509 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 LINGO4Q6UY18 593 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 ARHGAP36Q6ZRI8 547 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 RASGEF1CQ8N431 466 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 MFSD2AQ8NA29 543 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 MS4A14Q96JA4 679 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 OLFM3Q96PB7 478 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 PREBQ9HCU5 417 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 FTSJ1Q9UET6 329 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 SAR1BQ9Y6B6 198 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 DMXL2Q8TDJ6 3036 aa20.2■□□□□ 0.82
R3HCC1-210ENST00000625275 GOLGA8CPA6NN73 597 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 KIF2AO00139 706 aaPredicted RBP20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 TLR4O00206 839 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 KPNA3O00505 521 aaPredicted RBP20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 CES2O00748 559 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 ZMPSTE24O75844 475 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 FGGP02679 453 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 NR2C2P49116 596 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 TAS2R38P59533 333 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 SHBQ15464 509 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 SETMARQ53H47 684 aaPredicted RBP20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 PIP5KL1Q5T9C9 394 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 CCNI2Q6ZMN8 369 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms