RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 RBBP8Q99708 897 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ILKAPQ9H0C8 392 aaPredicted RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 RBM38Q9H0Z9 239 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 WDR41Q9HAD4 459 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 OR12D3Q9UGF7 316 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ZDHHC2Q9UIJ5 367 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 PRG3Q9Y2Y8 225 aaPredicted RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TIMM22Q9Y584 194 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TNFAIP8O95379 198 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 JCHAINP01591 159 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 TFEBP19484 476 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 RPL10P27635 214 aaKnown RBP13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 ART3Q13508 389 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 CCDC153Q494R4 210 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 BBS5Q8N3I7 341 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 PCDH20Q8N6Y1 951 aaKnown RBP13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 URGCPQ8TCY9 931 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 ATP6V1E2Q96A05 226 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 PCDHAC1Q9H158 963 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 TASP1Q9H6P5 420 aa13.52□□□□□ -0.24
PCDHB17P-202ENST00000623466 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 MATN2O00339 956 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 DAB1O75553 588 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 SOAT2O75908 522 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 FAM58BPP0C7Q3 252 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 MLNP12872 115 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 GRIA4P48058 902 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 ZBTB17Q13105 803 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 INAQ16352 499 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 UPP1Q16831 310 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 IL23RQ5VWK5 629 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 Q6ZNX1 250 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 LIMS2Q7Z4I7 341 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 ZNF280BQ86YH2 543 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 SPATA22Q8NHS9 363 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 CPNE1Q99829 537 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 TPK1Q9H3S4 243 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 EPB41L1Q9H4G0 881 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 NDFIP2Q9NV92 336 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 ATAD3AQ9NVI7 634 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 ADA2Q9NZK5 511 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
PCDHB17P-202ENST00000623466 DFFAO00273 331 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 LRIG2O94898 1065 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 SPRP35270 261 aaPredicted RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 GPR15P49685 360 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 ARPP19P56211 112 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 ZNF460Q14592 562 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 SEL1L3Q68CR1 1132 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 C16orf89Q6UX73 402 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 SCYL1Q96KG9 808 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 OMDQ99983 421 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 ARMC7Q9H6L4 198 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 CHRAC1Q9NRG0 131 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 IARS2Q9NSE4 1012 aaKnown RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 RAB26Q9ULW5 256 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 TRMUO75648 421 aaKnown RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 HDCP19113 662 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 TAC4Q86UU9 113 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 GFM2Q969S9 779 aaKnown RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 SGF29Q96ES7 293 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 ACE2Q9BYF1 805 aaPredicted RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 MRPS26Q9BYN8 205 aaKnown RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 C20orf96Q9NUD7 363 aaPredicted RBP13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
PCDHB17P-202ENST00000623466 HDAC3O15379 428 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 GRID2O43424 1007 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 PTPN3P26045 913 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 PRDX6P30041 224 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 RPL14P50914 215 aaKnown RBP13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 LIMK2P53671 638 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 CAMK2BQ13554 666 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 TICAM1Q8IUC6 712 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 CCNYL1Q8N7R7 359 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 SCAIQ8N9R8 606 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 PDCD6IPQ8WUM4 868 aaKnown RBP13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 EME1Q96AY2 570 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 MPP6Q9NZW5 540 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 TTC24A2A3L6 582 aaPredicted RBP13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 C7orf72A4D263 438 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 HHLA1C9JL84 531 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 CBFA2T3O75081 653 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 MT-CYBP00156 380 aaPredicted RBP13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 ME2P23368 584 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 PBX3P40426 434 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 STT3AP46977 705 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 EIF2B2P49770 351 aaKnown RBP13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 BCL2A1Q16548 175 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 DDR2Q16832 855 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 ZNF280DQ6N043 979 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 TRPV6Q9H1D0 765 aa13.5□□□□□ -0.25
PCDHB17P-202ENST00000623466 PRPF19Q9UMS4 504 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms