RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 ACP1P24666 158 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 BLKP51451 505 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 AP1S1P61966 158 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 DPYSQ14117 519 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 FGL2Q14314 439 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 LBRQ14739 615 aaKnown RBP13.19□□□□□ -0.3
ATRX-208ENST00000622960 LRRC14Q15048 493 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 UGP2Q16851 508 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 SPECC1LQ69YQ0 1117 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 KANSL1Q7Z3B3 1105 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 PROSER1Q86XN7 944 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 ARFGAP1Q8N6T3 406 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 NETO2Q8NC67 525 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 BMFQ96LC9 184 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 IL12RB2Q99665 862 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
ATRX-208ENST00000622960 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 CWC15Q9P013 229 aaKnown RBP13.19□□□□□ -0.3
ATRX-208ENST00000622960 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
ATRX-208ENST00000622960 SPASTQ9UBP0 616 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 APOBEC3BQ9UH17 382 aaKnown RBP13.19□□□□□ -0.3
ATRX-208ENST00000622960 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 ATP8A1Q9Y2Q0 1164 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 ZFHX4Q86UP3 3567 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 A0A087X0T9 212 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 TSPAN11A1L157 253 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 FAM149AA5PLN7 773 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 SRRM3A6NNA2 597 aaPredicted RBP13.18□□□□□ -0.3
ATRX-208ENST00000622960 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 SCAMP1O15126 338 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 RAD51BO15315 384 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 INSIG1O15503 277 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 AQP9O43315 295 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 CYP1A2P05177 515 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 ELFN1P0C7U0 828 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 FAM228BP0C875 321 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 RARAP10276 462 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 KRT10P13645 584 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 TIMP2P16035 220 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 GJC1P36383 396 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 RPIAP49247 311 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 SCNN1BP51168 640 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 CDH6P55285 790 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
ATRX-208ENST00000622960 FZD2Q14332 565 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 PROX2Q3B8N5 592 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 TMEM52BQ4KMG9 183 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 ZNF542PQ5EBM4 170 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 HES3Q5TGS1 186 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 AFMIDQ63HM1 303 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 ZCCHC8Q6NZY4 707 aaKnown RBP13.18□□□□□ -0.3
ATRX-208ENST00000622960 MACC1Q6ZN28 852 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 CAMK1DQ8IU85 385 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 MAP7D3Q8IWC1 876 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 NPWQ8N729 165 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 TSEN2Q8NCE0 465 aaKnown RBP13.18□□□□□ -0.3
ATRX-208ENST00000622960 ZNF548Q8NEK5 533 aaPredicted RBP13.18□□□□□ -0.3
ATRX-208ENST00000622960 ZNF564Q8TBZ8 553 aaPredicted RBP13.18□□□□□ -0.3
ATRX-208ENST00000622960 SCG3Q8WXD2 468 aaKnown RBP13.18□□□□□ -0.3
ATRX-208ENST00000622960 CSPG4P5Q96PW8 444 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 PCDH12Q9NPG4 1184 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 GPR27Q9NS67 375 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 UCKL1Q9NWZ5 548 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 UVRAGQ9P2Y5 699 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 CSNK1G3Q9Y6M4 447 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 CACNA1BQ00975 2339 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 PTPRBP23467 1997 aa13.18□□□□□ -0.3
ATRX-208ENST00000622960 TRIM38O00635 465 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 AKR1B10O60218 316 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 ANXA6P08133 673 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 CKMT1AP12532 417 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 C6P13671 934 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 CTSEP14091 401 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 IGFALSP35858 605 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 MMP12P39900 470 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 PFN3P60673 137 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 PPARDQ03181 441 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 ODF2Q5BJF6 829 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 FAXCQ5TGI0 409 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 CYP4V2Q6ZWL3 525 aaPredicted RBP13.17□□□□□ -0.3
ATRX-208ENST00000622960 POLNQ7Z5Q5 900 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 ARHGAP12Q8IWW6 846 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 PHACTR4Q8IZ21 702 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 SLC25A45Q8N413 288 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 LMX1AQ8TE12 382 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 PDCD6IPQ8WUM4 868 aaKnown RBP13.17□□□□□ -0.3
ATRX-208ENST00000622960 TSC1Q92574 1164 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 CENPTQ96BT3 561 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 PSKH2Q96QS6 385 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 KLF6Q99612 283 aaPredicted RBP13.17□□□□□ -0.3
ATRX-208ENST00000622960 SCUBE2Q9NQ36 999 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 CLCA2Q9UQC9 943 aa13.17□□□□□ -0.3
ATRX-208ENST00000622960 CABIN1Q9Y6J0 2220 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms