RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 GPR149Q86SP6 731 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 LMX1AQ8TE12 382 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 FNIP1Q8TF40 1166 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 HDAC10Q969S8 669 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 CDH19Q9H159 772 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 VPS45Q9NRW7 570 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 GLYATL1P3A0A0U1RQE8 302 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 CCNT2O60583 730 aaKnown RBP9.15□□□□□ -0.94
HDAC9-229ENST00000622668 EDN1P05305 212 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 IFNA8P32881 189 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 GNPDA1P46926 289 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 NRLP54845 237 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 IL10RBQ08334 325 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 MGAT5Q09328 741 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 RAVER1Q8IY67 606 aaKnown RBP9.15□□□□□ -0.94
HDAC9-229ENST00000622668 SPATA22Q8NHS9 363 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 FOXP3Q9BZS1 431 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 TBC1D17Q9HA65 648 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 GDF3Q9NR23 364 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 MARCH5Q9NX47 278 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 ARHGAP26Q9UNA1 814 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 ITM2BQ9Y287 266 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 ACOT9Q9Y305 439 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 AK5Q9Y6K8 562 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 BCORQ6W2J9 1755 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 MYH8P13535 1937 aa9.15□□□□□ -0.94
HDAC9-229ENST00000622668 QSOX1O00391 747 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 LINC01565O15544 149 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 AP5Z1O43299 807 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 CYP11A1P05108 521 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 NDST2P52849 883 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 WNT7BP56706 349 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 HNRNPDQ14103 355 aaKnown RBP9.15□□□□□ -0.95
HDAC9-229ENST00000622668 CNGA3Q16281 694 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 LONRF1Q17RB8 773 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 ADGRD2Q7Z7M1 963 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 FAM129CQ86XR2 697 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 KBTBD7Q8WVZ9 684 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 FOXJ1Q92949 421 aa9.15□□□□□ -0.95
HDAC9-229ENST00000622668 COL11A2P13942 1736 aaPredicted RBP9.15□□□□□ -0.95
HDAC9-229ENST00000622668 MYH9P35579 1960 aaKnown RBP9.15□□□□□ -0.95
HDAC9-229ENST00000622668 GSTA4O15217 222 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 NOL4O94818 638 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ETS1P14921 441 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 HTR7P34969 479 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 GPC1P35052 558 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ELK3P41970 407 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 PRKG2Q13237 762 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 DPYSL3Q14195 570 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 MEA1Q16626 185 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 C22orf39Q6P5X5 142 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 C15orf39Q6ZRI6 1047 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 C2orf73Q8N5S3 287 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ZNF614Q8N883 585 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 SLC26A7Q8TE54 656 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ETNK2Q9NVF9 386 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 TNS1Q9HBL0 1735 aaKnown RBP9.14□□□□□ -0.95
HDAC9-229ENST00000622668 SCN4AP35499 1836 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 WNT9AO14904 365 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 MT-CYBP00156 380 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-229ENST00000622668 CD48P09326 243 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 MYL2P10916 166 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ACP5P13686 325 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 SLC2A4P14672 509 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ALAS2P22557 587 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 CXCR2P25025 360 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 TTPAP49638 278 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 PCID2Q5JVF3 399 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 NPAS3Q8IXF0 933 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 TERB1Q8NA31 727 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 IL22Q9GZX6 179 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 POMKQ9H5K3 350 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 KCNK12Q9HB15 430 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 FANCEQ9HB96 536 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 KLQ9UEF7 1012 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 STON1Q9Y6Q2 735 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 MYH4Q9Y623 1939 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 DOCK3Q8IZD9 2030 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 hCG_1818297A0A087WSY0 165 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 A0A0G2JND7 137 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 SPECC1L-ADORA2AF8WAN1 911 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 BTN3A1O00481 513 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 CDH16O75309 829 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 LMAN2Q12907 356 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 LRRC14Q15048 493 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 CA9Q16790 459 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 DCAF4L2Q8NA75 395 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 NXPE3Q969Y0 559 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 OSBPL7Q9BZF2 842 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 SHCBP1LQ9BZQ2 653 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 TRABDQ9H4I3 376 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ELOVL6Q9H5J4 265 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 NMRK1Q9NWW6 199 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 RCOR3Q9P2K3 495 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-229ENST00000622668 NOCTQ9UK39 431 aaKnown RBP9.14□□□□□ -0.95
HDAC9-229ENST00000622668 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
HDAC9-229ENST00000622668 ANKRD31Q8N7Z5 1873 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms