RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 MIEF2Q96C03 454 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 BTN2A3PQ96KV6 586 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 FTHL17Q9BXU8 183 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 GTF2IRD1Q9UHL9 959 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 ATP11BQ9Y2G3 1177 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 RFPL1O75677 317 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 SP100P23497 879 aaPredicted RBP13.35□□□□□ -0.27
SIRPA-204ENST00000622179 PBX3P40426 434 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 PSME3P61289 254 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
SIRPA-204ENST00000622179 ZBTB17Q13105 803 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 FRG1Q14331 258 aaKnown RBP13.35□□□□□ -0.27
SIRPA-204ENST00000622179 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
SIRPA-204ENST00000622179 MIER2Q8N344 545 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 STAG3L4Q8TBR4 150 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 RDH11Q8TC12 318 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 STX18Q9P2W9 335 aaKnown RBP13.35□□□□□ -0.27
SIRPA-204ENST00000622179 TCAF1Q9Y4C2 921 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 KCNU1A8MYU2 1149 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 ZNF197O14709 1029 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 SEPT4O43236 478 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 GPR32O75388 356 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 SLC2A4P14672 509 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 FAM45BPQ6NSW5 357 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 HERC6Q8IVU3 1022 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 OR6K2Q8NGY2 324 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 FAM45AQ8TCE6 357 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 CASP10Q92851 521 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 PAAF1Q9BRP4 392 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 MYO1GB0I1T2 1018 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
SIRPA-204ENST00000622179 GJA5P36382 358 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 IL2P60568 153 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 KRT33BQ14525 404 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 HECTD2Q5U5R9 776 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 GPSM1Q86YR5 675 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 CDK5RAP1Q96SZ6 601 aaKnown RBP13.35□□□□□ -0.27
SIRPA-204ENST00000622179 YME1L1Q96TA2 773 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 ASPSCR1Q9BZE9 553 aa13.35□□□□□ -0.27
SIRPA-204ENST00000622179 IRAK2O43187 625 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 SMNDC1O75940 238 aaKnown RBP eCLIP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PRKCZQ05513 592 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 LRRC23Q53EV4 343 aaPredicted RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 GK5Q6ZS86 529 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 CUZD1Q86UP6 607 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 OR4L1Q8NH43 312 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 TMEM79Q9BSE2 394 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 EIF3LQ9Y262 564 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PRRC2BQ5JSZ5 2229 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 CFAP99D6REC4 459 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 SOCS7O14512 581 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 FKBP9O95302 570 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 SNRPB2P08579 225 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PSEN1P49768 467 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 CCNG1P51959 295 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PGGT1BP53609 377 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 FKBP9P1Q75LS8 142 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 RTL3Q8N8U3 475 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 SH3KBP1Q96B97 665 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 ACTR8Q9H981 624 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 CTPS1P17812 591 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 DYNC1I2Q13409 638 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 MOGSQ13724 837 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 STXBP5Q5T5C0 1151 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 TTC23LQ6PF05 361 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 CNSTQ6PJW8 725 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 HEXDCQ8WVB3 486 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 MRPL9Q9BYD2 267 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PNPLA8Q9NP80 782 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 CDH22Q9UJ99 828 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PCDHGB4Q9UN71 923 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 TRAF6Q9Y4K3 522 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 PCDHB9Q9Y5E1 797 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 LINC00032P0C843 101 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 HGFP14210 728 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 HSPA13P48723 471 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 OTUD3Q5T2D3 398 aaPredicted RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 TMEM198Q66K66 360 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 ARHGAP36Q6ZRI8 547 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 GPRIN1Q7Z2K8 1008 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 OR7D4Q8NG98 312 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 MLPHQ9BV36 600 aaPredicted RBP13.34□□□□□ -0.27
SIRPA-204ENST00000622179 KIF17Q9P2E2 1029 aa13.34□□□□□ -0.27
SIRPA-204ENST00000622179 DLDP09622 509 aaKnown RBP13.33□□□□□ -0.28
SIRPA-204ENST00000622179 RHOQP17081 205 aa13.33□□□□□ -0.28
SIRPA-204ENST00000622179 GRIA3P42263 894 aa13.33□□□□□ -0.28
SIRPA-204ENST00000622179 SLC1A2P43004 574 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms