RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 FSHRP23945 695 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 DLG1Q12959 904 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 HLFQ16534 295 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 GPAT3Q53EU6 434 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 MCOLN2Q8IZK6 566 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 MPP5Q8N3R9 675 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 MMP19Q99542 508 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 FEM1AQ9BSK4 669 aa11.67□□□□□ -0.54
CLTC-215ENST00000621829 GPN3Q9UHW5 284 aaPredicted RBP11.67□□□□□ -0.54
CLTC-215ENST00000621829 A0A075B6Q4 140 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 M0QX08 132 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 GJB6O95452 261 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 TXNP10599 105 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 HNRNPLP14866 589 aaKnown RBP eCLIP11.66□□□□□ -0.548e-8■□□□□ 8.6
CLTC-215ENST00000621829 NADK2Q4G0N4 442 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 C4orf46Q504U0 113 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RBM20Q5T481 1227 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 ARHGAP27Q6ZUM4 889 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 MTSS1LQ765P7 747 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ARMC10Q8N2F6 343 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 GHDCQ8N2G8 530 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RBM4BQ9BQ04 359 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 CBWD1Q9BRT8 395 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RBM4Q9BWF3 364 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 ABI2Q9NYB9 513 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 LNPEPQ9UIQ6 1025 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 MYH3P11055 1940 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 OGTO15294 1046 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 LRATO95237 230 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 IGKV5-2P06315 115 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 CSTF1Q05048 431 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 BIKQ13323 160 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 NAB1Q13506 487 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ILDR2Q71H61 639 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 MREGQ8N565 214 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 HTR3CQ8WXA8 447 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 REPS1Q96D71 796 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 ACSS2Q9NR19 701 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 TBC1D14Q9P2M4 693 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ABCC10Q5T3U5 1492 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 DCDC2CA8MYV0 355 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RPL35P42766 123 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 ZNF177Q13360 481 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 FAM76BQ5HYJ3 339 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 DUS1LQ6P1R4 473 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 ZNF517Q6ZMY9 492 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 ASB2Q96Q27 587 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RBM7Q9Y580 266 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 PCDHGC5Q9Y5F6 944 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 PEX16Q9Y5Y5 336 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RBM47A0AV96 593 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 NDUFS2O75306 463 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 MMP13P45452 471 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 PGDP52209 483 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 SNRPFP62306 86 aaKnown RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 BNIP3Q12983 259 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 OOSP2Q86WS3 158 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 OR2T34Q8NGX1 318 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 OR2T3Q8NH03 318 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 TBL1YQ9BQ87 522 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ADGRE3Q9BY15 652 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 TBC1D13Q9NVG8 400 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 PDP1Q9P0J1 537 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 FOXO6A8MYZ6 492 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 HGFP14210 728 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 IL6STP40189 918 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 TOB1P50616 345 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 CYP24A1Q07973 514 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 CDH17Q12864 832 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RALGPS2Q86X27 583 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 ATP6V0D2Q8N8Y2 350 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 RBM22Q9NW64 420 aaKnown RBP eCLIP11.66□□□□□ -0.549e-7■■■■□ 26.6
CLTC-215ENST00000621829 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 AKAP3O75969 853 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 FGFR1P11362 822 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ZNF14P17017 642 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 CYP2A7P20853 494 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 NPNTQ6UXI9 565 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 IL25Q9H293 177 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 SMPD3Q9NY59 655 aaPredicted RBP11.66□□□□□ -0.54
CLTC-215ENST00000621829 COQ3Q9NZJ6 369 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 AP3M1Q9Y2T2 418 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ZNF451Q9Y4E5 1061 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ACTL7BQ9Y614 415 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ARHGEF40Q8TER5 1519 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 FAM47E-STBD1D6RA91 191 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 PLK4O00444 970 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 SNX4O95219 450 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ITGA2P17301 1181 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 FUT4P22083 530 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 CBX5P45973 191 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 ANTXR2P58335 489 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 NIPAL1Q6NVV3 410 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 CST11Q9H112 138 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 GPRC5CQ9NQ84 441 aa11.66□□□□□ -0.54
CLTC-215ENST00000621829 AHSPQ9NZD4 102 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms