RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.33■□□□□ 0.36
HMGN3-203ENST00000620514 ANAPC7Q9UJX3 599 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 ZZEF1O43149 2961 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 CYP1A2P05177 515 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 JUPP14923 745 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 NME1P15531 152 aaKnown RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 CSNK1DP48730 415 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 ZNF135P52742 658 aaPredicted RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 HNRNPKP61978 463 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 DAB2P98082 770 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 SLC25A11Q02978 314 aaKnown RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 IL10RBQ08334 325 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 CYP4F3Q08477 520 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 PIGHQ14442 188 aaPredicted RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 GRM3Q14832 879 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 BOLA3Q53S33 107 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 CCDC122Q5T0U0 273 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 ALKBH5Q6P6C2 394 aaKnown RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 CPNE8Q86YQ8 564 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 ZNF548Q8NEK5 533 aaPredicted RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 HCAR2Q8TDS4 363 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 IQCDQ96DY2 449 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 ZNF641Q96N77 438 aaPredicted RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 CSPG4P5Q96PW8 444 aa17.32■□□□□ 0.36
HMGN3-203ENST00000620514 TCEAL2Q9H3H9 227 aaPredicted RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 PNMA8BQ9ULN7 279 aaPredicted RBP17.32■□□□□ 0.36
HMGN3-203ENST00000620514 TTC24A2A3L6 582 aaPredicted RBP17.31■□□□□ 0.36
HMGN3-203ENST00000620514 K7ESM1 405 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
HMGN3-203ENST00000620514 SCAMP1O15126 338 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 CDK4P11802 303 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 C6P13671 934 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 JUNDP17535 347 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 PTMSP20962 102 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 ARL4AP40617 200 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 SUOXP51687 545 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 SLC10A7Q0GE19 358 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 ELP6Q0PNE2 266 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 TARDBPQ13148 414 aaKnown RBP eCLIP17.31■□□□□ 0.36
HMGN3-203ENST00000620514 ILKQ13418 452 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 IRF4Q15306 451 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 CFAP58Q5T655 872 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 RBFAQ8N0V3 343 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 LZTR1Q8N653 840 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 NIPA2Q8N8Q9 360 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 TUBGCP5Q96RT8 1024 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 PCDH18Q9HCL0 1135 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 NLGN3Q9NZ94 848 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 IP6K2Q9UHH9 426 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 NENFQ9UMX5 172 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 PKD1L2Q7Z442 2459 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 CFAP47Q6ZTR5 3102 aa17.31■□□□□ 0.36
HMGN3-203ENST00000620514 DMXL2Q8TDJ6 3036 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 LY6G6EA0A0G2JKS1 128 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 SERPINA4P29622 427 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 EIF4A3P38919 411 aaKnown RBP17.3■□□□□ 0.36
HMGN3-203ENST00000620514 MMP12P39900 470 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 SCNN1BP51168 640 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 THOP1P52888 689 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 INSM1Q01101 510 aaPredicted RBP17.3■□□□□ 0.36
HMGN3-203ENST00000620514 RFTN1Q14699 578 aaPredicted RBP17.3■□□□□ 0.36
HMGN3-203ENST00000620514 LBRQ14739 615 aaKnown RBP17.3■□□□□ 0.36
HMGN3-203ENST00000620514 WSCD2Q2TBF2 565 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 HS1BP3Q53T59 392 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 BRAT1Q6PJG6 821 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 TMCO3Q6UWJ1 677 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
HMGN3-203ENST00000620514 LMX1AQ8TE12 382 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 TEKT4Q8WW24 435 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 APOLD1Q96LR9 279 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 C1QTNF7Q9BXJ2 289 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 ATP13A3Q9H7F0 1226 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 ATP8A1Q9Y2Q0 1164 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 RAXQ9Y2V3 346 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 U3KQA8 63 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 CHD6Q8TD26 2715 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 LRRK1Q38SD2 2015 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 FREM2Q5SZK8 3169 aa17.3■□□□□ 0.36
HMGN3-203ENST00000620514 KNTC1P50748 2209 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 APC2O95996 2303 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 NEMP2A6NFY4 417 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 H3BM21 787 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 AQP9O43315 295 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 PEX11BO96011 259 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 CD48P09326 243 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 ALPPL2P10696 532 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 CKMT1AP12532 417 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 HNF1BP35680 557 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 SSR1P43307 286 aaKnown RBP17.29■□□□□ 0.36
HMGN3-203ENST00000620514 LIG3P49916 1009 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 BCL2L1Q07817 233 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 NSUN2Q08J23 767 aaKnown RBP eCLIP17.29■□□□□ 0.36
HMGN3-203ENST00000620514 MMRN1Q13201 1228 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 DEFB133Q30KQ1 61 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 TMCO4Q5TGY1 634 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 ERAP2Q6P179 960 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 NYAP1Q6ZVC0 841 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 ECHDC3Q96DC8 303 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 PSKH2Q96QS6 385 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 PACSIN1Q9BY11 444 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms