RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 SLC7A4O43246 635 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 RNASEH2AO75792 299 aaKnown RBP19.88■□□□□ 0.77
UPF3A-211ENST00000618700 ZSCAN5DPP0CG00 497 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 ETS1P14921 441 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 NEK3P51956 506 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 CKAP4Q07065 602 aaKnown RBP19.88■□□□□ 0.77
UPF3A-211ENST00000618700 CNTN1Q12860 1018 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 SFSWAPQ12872 951 aaKnown RBP19.88■□□□□ 0.77
UPF3A-211ENST00000618700 PARP6Q2NL67 630 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 MAP7D1Q3KQU3 841 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 KDELC1Q6UW63 502 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 ERN2Q76MJ5 926 aaKnown RBP19.88■□□□□ 0.77
UPF3A-211ENST00000618700 GSTA5Q7RTV2 222 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 PRUNE1Q86TP1 453 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 GRK7Q8WTQ7 553 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 PCDH9Q9HC56 1237 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 DYRK4Q9NR20 520 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 PAK5Q9P286 719 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 FAM153AQ9UHL3 310 aa19.88■□□□□ 0.77
UPF3A-211ENST00000618700 IGHV1OR15-9A0A0B4J2B8 117 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 PGLSO95336 258 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 METTL18O95568 372 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 PRLP01236 227 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 ADRB3P13945 408 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 CA4P22748 312 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 RPL22P35268 128 aaKnown RBP19.87■□□□□ 0.77
UPF3A-211ENST00000618700 RUNDC3BQ96NL0 473 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 PPP1R2P1Q96PQ5 205 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 TRIB3Q96RU7 358 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 OMDQ99983 421 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 MLPHQ9BV36 600 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-211ENST00000618700 NEUROG2Q9H2A3 272 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 UBP1Q9NZI7 540 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 FEZ2Q9UHY8 353 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-211ENST00000618700 CYP8B1Q9UNU6 501 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 WDFY4Q6ZS81 3184 aa19.87■□□□□ 0.77
UPF3A-211ENST00000618700 A0A1W2PQ67 120 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 SPINT1O43278 529 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 ANXA9O76027 345 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 ECEL1O95672 775 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 PDHA1P08559 390 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 TIMP2P16035 220 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 ABL2P42684 1182 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 GEMP55040 296 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 MPP3Q13368 585 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 CFAP58Q5T655 872 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 ARMC12Q5T9G4 340 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 C4orf22Q6V702 233 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 KLHL7Q8IXQ5 586 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 ZBTB44Q8NCP5 570 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 RLN3Q8WXF3 142 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 ZSCAN32Q9NX65 697 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 NCKAP1Q9Y2A7 1128 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 PCDHB9Q9Y5E1 797 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 CACNA1HO95180 2353 aa19.86■□□□□ 0.77
UPF3A-211ENST00000618700 UPK3BL1B0FP48 263 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 C10orf142B7Z368 130 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 UPK3BL2E5RIL1 263 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PLRG1O43660 514 aaKnown RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PMPCBO75439 489 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 GAS8O95995 478 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 CPP00450 1065 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 OXTRP30559 389 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 ACTN2P35609 894 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 FDFT1P37268 417 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PTGIRP43119 386 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 SUOXP51687 545 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 ADPRHP54922 357 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 WNT3AP56704 352 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 TAS2R38P59533 333 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 RPL26P61254 145 aaKnown RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 C2orf54Q08AI8 447 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 TCF15Q12870 199 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PRPSAP1Q14558 356 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 UGP2Q16851 508 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 KCTD19Q17RG1 926 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 USP39Q53GS9 565 aaKnown RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 KCTD11Q693B1 232 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 FBXL19Q6PCT2 694 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 GANCQ8TET4 914 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PDCD6IPQ8WUM4 868 aaKnown RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PIH1D2Q8WWB5 315 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 RAB7BQ96AH8 199 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 FEM1CQ96JP0 617 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 SPACA7Q96KW9 195 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 MRGPRX2Q96LB1 330 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 SGK2Q9HBY8 427 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 WSB2Q9NYS7 404 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 RPL26L1Q9UNX3 145 aaKnown RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 CHKBQ9Y259 395 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 AAR2Q9Y312 384 aaKnown RBP19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PPIL1Q9Y3C6 166 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 PCDHGA2Q9Y5H1 932 aa19.85■□□□□ 0.77
UPF3A-211ENST00000618700 MUC6Q6W4X9 2439 aa19.84■□□□□ 0.77
UPF3A-211ENST00000618700 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-211ENST00000618700 LOC285095A0A1B0GVY8 99 aa19.84■□□□□ 0.77
UPF3A-211ENST00000618700 AREL1O15033 823 aa19.84■□□□□ 0.77
UPF3A-211ENST00000618700 AP1G1O43747 822 aa19.84■□□□□ 0.77
UPF3A-211ENST00000618700 KRT14P02533 472 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms