RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 GTF2IRD1Q9UHL9 959 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 SLC24A2Q9UI40 661 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 SYNPO2Q9UMS6 1093 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 GTF2A1LQ9UNN4 478 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CFAP73A6NFT4 308 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CXorf49A8MYA2 514 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 PRR5-ARHGAP8B1AHC4 643 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FAM72CH0Y354 149 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 NCAM2O15394 837 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CNTN5O94779 1100 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ITGAVP06756 1048 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ADH1AP07327 375 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PSMC3P17980 439 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CES1P23141 567 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 SERPINA4P29622 427 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ICAM3P32942 547 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 NPY2RP49146 381 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 GLUD2P49448 558 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ARHGAP8P85298 464 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CDK18Q07002 472 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 SLC10A7Q0GE19 358 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 RALGDSQ12967 914 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PPP1R8Q12972 351 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 MSS51Q4VC12 460 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FAM72AQ5TYM5 149 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FAM72DQ6L9T8 149 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ARMC6Q6NXE6 501 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PACS2Q86VP3 889 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FAM72BQ86X60 149 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ZDHHC17Q8IUH5 632 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 IQCKQ8N0W5 287 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 RIBC1Q8N443 379 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 SLC22A17Q8WUG5 538 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ART4Q93070 314 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 LINGO1Q96FE5 620 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TSSK3Q96PN8 268 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CDK15Q96Q40 435 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PPP1R10Q96QC0 940 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 NPAS2Q99743 824 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 NTPCRQ9BSD7 190 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 SLC39A8Q9C0K1 460 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 IL22Q9GZX6 179 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ALG2Q9H553 416 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ABCB8Q9NUT2 735 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 OSER1Q9NX31 292 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 SNX5Q9Y5X3 404 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ACTL7AQ9Y615 435 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PLIN4Q96Q06 1357 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 AGPSO00116 658 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 CSH1P0DML2 217 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 CSH2P0DML3 217 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 ZNF7P17097 686 aaPredicted RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 GPR1P46091 355 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 RTP1P59025 263 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 IL2P60568 153 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 IRF9Q00978 393 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 VAC14Q08AM6 782 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 GRM3Q14832 879 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 CAPRIN2Q6IMN6 1127 aaKnown RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 ALKBH2Q6NS38 261 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 AMIGO2Q86SJ2 522 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 ANKRD46Q86W74 232 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 HORMAD1Q86X24 394 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 RASAL3Q86YV0 1011 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 SIX5Q8N196 739 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 UTP15Q8TED0 518 aaKnown RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 SELENOMQ8WWX9 145 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 MYCBPQ99417 103 aaPredicted RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 SLC4A5Q9BY07 1137 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 GRIP2Q9C0E4 1043 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 AASDHPPTQ9NRN7 309 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 SCN11AQ9UI33 1791 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 NPEPPSL1A6NEC2 478 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 SNX3O60493 162 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 ERAL1O75616 437 aaKnown RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 SERPINE1P05121 402 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 THOP1P52888 689 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 DAOAP59103 153 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 RPL38P63173 70 aaKnown RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 TEX44Q53QW1 395 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 TMEM198Q66K66 360 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 ANKS6Q68DC2 871 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 CES5AQ6NT32 575 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 BNC2Q6ZN30 1099 aaPredicted RBP3.82□□□□□ -1.8
LTN1-207ENST00000614971 GCNT7Q6ZNI0 430 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 GPRIN1Q7Z2K8 1008 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 AGGF1Q8N302 714 aaeCLIP3.82□□□□□ -1.8
LTN1-207ENST00000614971 ZNF670Q9BS34 389 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 C16orf70Q9BSU1 422 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 TRIM15Q9C019 465 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 NMUR2Q9GZQ4 415 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.82□□□□□ -1.8
LTN1-207ENST00000614971 KLHL25Q9H0H3 589 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 BRD9Q9H8M2 597 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 EFCAB1Q9HAE3 211 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 RIC8BQ9NVN3 520 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 LIMD1Q9UGP4 676 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 SLC2A6Q9UGQ3 507 aa3.82□□□□□ -1.8
LTN1-207ENST00000614971 SLC12A4Q9UP95 1085 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms