RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FSTL5Q8N475 847 aaPredicted RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 SPATA22Q8NHS9 363 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 RP9Q8TA86 221 aaKnown RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 PDCD6IPQ8WUM4 868 aaKnown RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 CCDC124Q96CT7 223 aaKnown RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 ZNF419Q96HQ0 510 aaPredicted RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 TRAPPC9Q96Q05 1148 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 FBXO44Q9H4M3 255 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 GLOD4Q9HC38 313 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 VPS28Q9UK41 221 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 A0A1W2PQH9 124 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 MATN3O15232 486 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 PHGDHO43175 533 aaKnown RBP14.83□□□□□ -0.04
CDH1-213ENST00000612417 GRID2O43424 1007 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 MAFKO60675 156 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 PIGNO95427 931 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 FESP07332 822 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 ARNTP27540 789 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 ADRA1AP35348 466 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 PGFP49763 221 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 RAB10P61026 200 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 RPL26P61254 145 aaKnown RBP14.83□□□□□ -0.04
CDH1-213ENST00000612417 GPR17Q13304 367 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 PEX6Q13608 980 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 HERC3Q15034 1050 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 LSM12Q3MHD2 195 aaKnown RBP14.83□□□□□ -0.04
CDH1-213ENST00000612417 LRRC8EQ6NSJ5 796 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 ACAD11Q709F0 780 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 TMC7Q7Z402 723 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 KCTD4Q8WVF5 259 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 IGSF21Q96ID5 467 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 GPR78Q96P69 363 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 ENTPD7Q9NQZ7 604 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 STK39Q9UEW8 545 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 NUDT5Q9UKK9 219 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 ADAMTS6Q9UKP5 1117 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 ACOT9Q9Y305 439 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 TCAF1Q9Y4C2 921 aa14.83□□□□□ -0.04
CDH1-213ENST00000612417 MTMR11A4FU01 709 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 DFFAO00273 331 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 PEX1O43933 1283 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 ZMPSTE24O75844 475 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 PIM1P11309 404 aaPredicted RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 RPL17P18621 184 aaKnown RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 PPARGP37231 505 aaPredicted RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 NAGLUP54802 743 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 GEMP55040 296 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 DUSP4Q13115 394 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 RWDD4Q6NW29 188 aaKnown RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 C16orf89Q6UX73 402 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 ARHGAP36Q6ZRI8 547 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 SCD5Q86SK9 330 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 LSMEM2Q8N112 164 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 PPHLN1Q8NEY8 458 aaKnown RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 FBXO22Q8NEZ5 403 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 SPPL2BQ8TCT7 592 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 UBE2OQ9C0C9 1292 aaKnown RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 KLHL4Q9C0H6 718 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 CATSPERBQ9H7T0 1116 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 NMUR1Q9HB89 426 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 TREX1Q9NSU2 369 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 SPATS2LQ9NUQ6 558 aaKnown RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 SFMBT1Q9UHJ3 866 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 SCML2Q9UQR0 700 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 RUVBL2Q9Y230 463 aaKnown RBP14.82□□□□□ -0.04
CDH1-213ENST00000612417 DOCK4Q8N1I0 1966 aa14.82□□□□□ -0.04
CDH1-213ENST00000612417 H3BNX3 289 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 KIAA0355O15063 1070 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 TBC1D4O60343 1298 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 DLX3O60479 287 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 MT-CYBP00156 380 aaPredicted RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 STMN1P16949 149 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 USP46P62068 366 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 SMARCB1Q12824 385 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 MTA1Q13330 715 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 PSMD5Q16401 504 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 TCHHL1Q5QJ38 904 aaPredicted RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 AFMIDQ63HM1 303 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 MON1AQ86VX9 555 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 SLC41A1Q8IVJ1 513 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 KYQ8NBH2 561 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 AGR3Q8TD06 166 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 USP33Q8TEY7 942 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 SCYL1Q96KG9 808 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 ZNF558Q96NG5 402 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 SERPINI1Q99574 410 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 FAM192AQ9GZU8 254 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 SMOC2Q9H3U7 446 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 WDR55Q9H6Y2 383 aaPredicted RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 ZDHHC2Q9UIJ5 367 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 BPTFQ12830 3046 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 GOLGA8QA0A0J9YX86 632 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 FAM95CA0A1B0GW59 222 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 GOLGA8OA6NCC3 632 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 GOLGA8NF8WBI6 632 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 AHCYL1O43865 530 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 NPHS1O60500 1241 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms