RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 AP1G1O43747 822 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 SLU7O95391 586 aaKnown RBP22.05■■□□□ 1.12
CBWD3-207ENST00000611426 ZNF143P52747 638 aaPredicted RBP22.05■■□□□ 1.12
CBWD3-207ENST00000611426 ZNF211Q13398 564 aaPredicted RBP22.05■■□□□ 1.12
CBWD3-207ENST00000611426 PROX2Q3B8N5 592 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 EFHC2Q5JST6 749 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 HES3Q5TGS1 186 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 MEI1Q5TIA1 1274 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 C11orf63Q6NUN7 778 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 DCP2Q8IU60 420 aaKnown RBP22.05■■□□□ 1.12
CBWD3-207ENST00000611426 OR2AP1Q8NGE2 309 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 UCKL1Q9NWZ5 548 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 SNX12Q9UMY4 172 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 SAR1BQ9Y6B6 198 aa22.05■■□□□ 1.12
CBWD3-207ENST00000611426 URB1O60287 2271 aaKnown RBP22.05■■□□□ 1.12
CBWD3-207ENST00000611426 C16orf96A6NNT2 1141 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 NEMP1O14524 444 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 POP4O95707 220 aaKnown RBP22.04■■□□□ 1.12
CBWD3-207ENST00000611426 GSRP00390 522 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 TCP1P17987 556 aaKnown RBP22.04■■□□□ 1.12
CBWD3-207ENST00000611426 ACP1P24666 158 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 EPHB2P29323 1055 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 TARDBPQ13148 414 aaKnown RBP eCLIP22.04■■□□□ 1.12
CBWD3-207ENST00000611426 SGCGQ13326 291 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 FGL2Q14314 439 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 MYLK3Q32MK0 819 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 ZNF805Q5CZA5 627 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 PTAR1Q7Z6K3 402 aaPredicted RBP22.04■■□□□ 1.12
CBWD3-207ENST00000611426 DNAAF5Q86Y56 855 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 SLC22A18ASQ8N1D0 253 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 PYROXD2Q8N2H3 581 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 HNRNPLLQ8WVV9 542 aaKnown RBP22.04■■□□□ 1.12
CBWD3-207ENST00000611426 RAB7BQ96AH8 199 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 BMFQ96LC9 184 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 CACNA1GO43497 2377 aa22.04■■□□□ 1.12
CBWD3-207ENST00000611426 ZSCAN5CA6NGD5 496 aaPredicted RBP22.03■■□□□ 1.12
CBWD3-207ENST00000611426 CES2O00748 559 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 FFAR2O15552 330 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 TSPAN6O43657 245 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 NOP2P46087 812 aaKnown RBP22.03■■□□□ 1.12
CBWD3-207ENST00000611426 NAP1L1P55209 391 aaKnown RBP22.03■■□□□ 1.12
CBWD3-207ENST00000611426 DAB2P98082 770 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 OR4C6Q8NH72 309 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 IFT43Q96FT9 208 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 MCEEQ96PE7 176 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 HYOU1Q9Y4L1 999 aa22.03■■□□□ 1.12
CBWD3-207ENST00000611426 TCRBV5S1A1TA0A578 114 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 POM121BA6NF01 834 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 IGLON5A6NGN9 336 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 RAD51BO15315 384 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 CREB3O43889 395 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 PIAS2O75928 621 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 UGT2B4P06133 528 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 ABL2P42684 1182 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 RPL7AP62424 266 aaKnown RBP22.02■■□□□ 1.12
CBWD3-207ENST00000611426 COL28A1Q2UY09 1125 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 ZNF542PQ5EBM4 170 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 ATXN7L2Q5T6C5 722 aaPredicted RBP22.02■■□□□ 1.12
CBWD3-207ENST00000611426 DCUN1D2Q6PH85 259 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 KYAT3Q6YP21 454 aaKnown RBP22.02■■□□□ 1.12
CBWD3-207ENST00000611426 RTL3Q8N8U3 475 aaKnown RBP22.02■■□□□ 1.12
CBWD3-207ENST00000611426 ZNF653Q96CK0 615 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 NXPE2Q96DL1 559 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 KLHL32Q96NJ5 620 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 CNPY3Q9BT09 278 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 OSBPL1AQ9BXW6 950 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 DNAJC28Q9NX36 388 aa22.02■■□□□ 1.12
CBWD3-207ENST00000611426 NEMP2A6NFY4 417 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 FPGTO14772 594 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 BUB1BO60566 1050 aaPredicted RBP22.01■■□□□ 1.11
CBWD3-207ENST00000611426 ALPPL2P10696 532 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 DESP17661 470 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 RABIFP47224 123 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 RAD51Q06609 339 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 PPP1R15BQ5SWA1 713 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 PLEKHA7Q6IQ23 1121 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 GDPD4Q6W3E5 623 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 CASKIN2Q8WXE0 1202 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 LENG8Q96PV6 779 aaPredicted RBP22.01■■□□□ 1.11
CBWD3-207ENST00000611426 EPAS1Q99814 870 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 C1QTNF2Q9BXJ5 285 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 NOL6Q9H6R4 1146 aaKnown RBP22.01■■□□□ 1.11
CBWD3-207ENST00000611426 CATSPERBQ9H7T0 1116 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 CAAP1Q9H8G2 361 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 CTTNBP2NLQ9P2B4 639 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 IPO11Q9UI26 975 aaKnown RBP22.01■■□□□ 1.11
CBWD3-207ENST00000611426 FZD10Q9ULW2 581 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 AK5Q9Y6K8 562 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 MYLKQ15746 1914 aa22.01■■□□□ 1.11
CBWD3-207ENST00000611426 TMCC1O94876 653 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 AIF1P55008 147 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 YBEYP58557 167 aaPredicted RBP22■■□□□ 1.11
CBWD3-207ENST00000611426 HNRNPKP61978 463 aaKnown RBP eCLIP22■■□□□ 1.11
CBWD3-207ENST00000611426 E2F1Q01094 437 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 ZNF572Q7Z3I7 529 aaPredicted RBP22■■□□□ 1.11
CBWD3-207ENST00000611426 TTC7BQ86TV6 843 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 CEP112Q8N8E3 955 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 GDAP1L1Q96MZ0 367 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 KLF6Q99612 283 aaPredicted RBP22■■□□□ 1.11
CBWD3-207ENST00000611426 SCUBE2Q9NQ36 999 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms