RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 LILRA4P59901 499 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 ENPEPQ07075 957 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 PREPLQ4J6C6 727 aaPredicted RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 SPPL2BQ8TCT7 592 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 CCDC3Q9BQI4 270 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 AGO3Q9H9G7 860 aaKnown RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 KLHL28Q9NXS3 571 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 LEF1Q9UJU2 399 aaPredicted RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 TRIM38O00635 465 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 DLGAP3O95886 979 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 GSNP06396 782 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 SOX6P35712 828 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 SLC5A3P53794 718 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 ATP6V0D1P61421 351 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 CLNKQ7Z7G1 428 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 FBXW8Q8N3Y1 598 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 ZNF513Q8N8E2 541 aaPredicted RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 SUSD6Q92537 303 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 NMUR2Q9GZQ4 415 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 FZD8Q9H461 694 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 GMIPQ9P107 970 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 STK39Q9UEW8 545 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 C2orf71A6NGG8 1288 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 PTGES3LE9PB15 166 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 ELNP15502 786 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 KRT20P35900 424 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 CYP2A13Q16696 494 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 BTN2A3PQ96KV6 586 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 C1orf50Q9BV19 199 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 SNX6Q9UNH7 406 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 HBS1LQ9Y450 684 aaKnown RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 MC4RP32245 332 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 ASPAP45381 313 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 RPL38P63173 70 aaKnown RBP14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 BNIPLQ7Z465 357 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 ECHDC2Q86YB7 292 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 CAMK1DQ8IU85 385 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 STARD8Q92502 1023 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 DPF3Q92784 378 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 ZMAT2Q96NC0 199 aaKnown RBP14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 HNRNPABQ99729 332 aaKnown RBP14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 TTPALQ9BTX7 342 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 WDR55Q9H6Y2 383 aaPredicted RBP14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 DDX18Q9NVP1 670 aaKnown RBP14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 TMCO1Q9UM00 188 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 CHKBQ9Y259 395 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.11
PCDHB16-201ENST00000609684 C22orf31O95567 290 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 NTRK1P04629 796 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 RPN2P04844 631 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 HK2P52789 917 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 NCF4Q15080 339 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 MAPKAPK3Q16644 382 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 VSTM1Q6UX27 236 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 CLYBLQ8N0X4 340 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 NLGN2Q8NFZ4 835 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 ZNF516Q92618 1163 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 LINGO1Q96FE5 620 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 COPG2Q9UBF2 871 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 LINC00854A0A1B0GVQ3 168 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 TBC1D3BA6NDS4 549 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 SNUPNO95149 360 aaKnown RBP14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 MPSTP25325 297 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 MARK2Q7KZI7 788 aaKnown RBP14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 SETD9Q8NE22 299 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 MAGEE2Q8TD90 523 aaPredicted RBP14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 TLCD1Q96CP7 247 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 SHISA4Q96DD7 197 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 MPP4Q96JB8 637 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 APOL4Q9BPW4 351 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 SLC4A5Q9BY07 1137 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 A0A0G2JLL6 359 aaPredicted RBP14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 SHOX2O60902 331 aaPredicted RBP14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 LRIG2O94898 1065 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 LINC00032P0C843 101 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 PPM1JQ5JR12 505 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 PAGE2BQ5JRK9 111 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 FGD3Q5JSP0 725 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 PRRT2Q7Z6L0 340 aaPredicted RBP14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 OR6K2Q8NGY2 324 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 PCED1BQ96HM7 432 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 PPP3R2Q96LZ3 170 aa14.33□□□□□ -0.12
PCDHB16-201ENST00000609684 GLTPD2A6NH11 291 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 PMM2O15305 246 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 DHX15O43143 795 aaKnown RBP14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 AP2A1O95782 977 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 CYP3A5P20815 502 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 TMED10P49755 219 aaKnown RBP14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 NDUFV1P49821 464 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 GDF10P55107 478 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 RHBDF2Q6PJF5 856 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 CNSTQ6PJW8 725 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 CCDC103Q8IW40 242 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 MFSD3Q96ES6 412 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 BBS4Q96RK4 519 aa14.32□□□□□ -0.12
PCDHB16-201ENST00000609684 PRRG3Q9BZD7 231 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms