RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 ITGADQ13349 1161 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 SNTA1Q13424 505 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 HSPB2Q16082 182 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 TAF12Q16514 161 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 NFIL3Q16649 462 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 ESCO2Q56NI9 601 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 WDR45BQ5MNZ6 344 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 NEK10Q6ZWH5 1172 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 GPAT4Q86UL3 456 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 LSM14AQ8ND56 463 aaKnown RBP4.52□□□□□ -1.69
HDDC2-207ENST00000608532 DNASE2BQ8WZ79 361 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 ERGIC1Q969X5 290 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 LRFN5Q96NI6 719 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 OR1F2PQ96R84 312 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 DDX31Q9H8H2 851 aaKnown RBP4.52□□□□□ -1.69
HDDC2-207ENST00000608532 SNX9Q9Y5X1 595 aa4.52□□□□□ -1.69
HDDC2-207ENST00000608532 SAA2-SAA4A0A096LPE2 208 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 CBY3A6NI87 242 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 KLRF2D3W0D1 207 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 EIF3FO00303 357 aaPredicted RBP4.51□□□□□ -1.69
HDDC2-207ENST00000608532 CLGNO14967 610 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 SLC16A5O15375 505 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 MTA2O94776 668 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 SNRNP70P08621 437 aaKnown RBP4.51□□□□□ -1.69
HDDC2-207ENST00000608532 PCNAP12004 261 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 PTPN2P17706 415 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 EDN2P20800 178 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 RYKP34925 604 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 PGM1P36871 562 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 UBE3AQ05086 875 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 CHRNDQ07001 517 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 HYAL1Q12794 435 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 EFR3AQ14156 821 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 VEPH1Q14D04 833 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 SOWAHAQ2M3V2 549 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 ZNF718Q3SXZ3 478 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 FAM76BQ5HYJ3 339 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 ZNF667Q5HYK9 610 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 MAP3K21Q5TCX8 1036 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 LRRC8EQ6NSJ5 796 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 CCDC129Q6ZRS4 1044 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 CUZD1Q86UP6 607 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 ZC3HC1Q86WB0 502 aaKnown RBP4.51□□□□□ -1.69
HDDC2-207ENST00000608532 ANKRD18AQ8IVF6 992 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 ZNF114Q8NC26 417 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 SCMH1Q96GD3 660 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 SIN3AQ96ST3 1273 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 PHF7Q9BWX1 381 aaPredicted RBP4.51□□□□□ -1.69
HDDC2-207ENST00000608532 TTYH1Q9H313 450 aaPredicted RBP4.51□□□□□ -1.69
HDDC2-207ENST00000608532 ZNF556Q9HAH1 456 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 SNTG1Q9NSN8 517 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 HSF4Q9ULV5 492 aa4.51□□□□□ -1.69
HDDC2-207ENST00000608532 IFRD1O00458 451 aaPredicted RBP4.5□□□□□ -1.69
HDDC2-207ENST00000608532 HSPA12AO43301 675 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 BUB3O43684 328 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 ZIC3O60481 467 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 DDNO94850 711 aaPredicted RBP4.5□□□□□ -1.69
HDDC2-207ENST00000608532 NR1H2P55055 460 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 CLDN2P57739 230 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 DLG1Q12959 904 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 CALCRLQ16602 461 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 TNIP2Q8NFZ5 429 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 SPATA3Q8NHX4 192 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 NEK9Q8TD19 979 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 SCLT1Q96NL6 688 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 CSF3RQ99062 836 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 CISD1Q9NZ45 108 aaKnown RBP4.5□□□□□ -1.69
HDDC2-207ENST00000608532 SLC9A2Q9UBY0 812 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 A3GALT2U3KPV4 340 aa4.5□□□□□ -1.69
HDDC2-207ENST00000608532 IGHV4-30-4P0DP06 118 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 CNTFP26441 200 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 POU1F1P28069 291 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 TAF11Q15544 211 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 ZNF672Q499Z4 452 aaPredicted RBP4.49□□□□□ -1.69
HDDC2-207ENST00000608532 SERTAD4-AS1Q5TG53 156 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 TADA2BQ86TJ2 420 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 CPOQ8IVL8 374 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 SPATA20Q8TB22 786 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 CREB3L4Q8TEY5 395 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 NOC3LQ8WTT2 800 aaKnown RBP4.49□□□□□ -1.69
HDDC2-207ENST00000608532 ELP4Q96EB1 424 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 BBS4Q96RK4 519 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 MMTAG2Q9BU76 263 aaKnown RBP4.49□□□□□ -1.69
HDDC2-207ENST00000608532 GAREM1Q9H706 876 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 NOX4Q9NPH5 578 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 CNOT7Q9UIV1 285 aaKnown RBP4.49□□□□□ -1.69
HDDC2-207ENST00000608532 CDC14AQ9UNH5 594 aa4.49□□□□□ -1.69
HDDC2-207ENST00000608532 NDUFB4O95168 129 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 IGKV3-20P01619 116 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 URODP06132 367 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 GPD2P43304 727 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 CDH15P55291 814 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 EFNB1P98172 346 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 POU3F1Q03052 451 aaPredicted RBP4.48□□□□□ -1.69
HDDC2-207ENST00000608532 ZNF628Q5EBL2 1059 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 C9orf50Q5SZB4 431 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 FAM69BQ5VUD6 431 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 BBS12Q6ZW61 710 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 LRRTM4Q86VH4 590 aa4.48□□□□□ -1.69
HDDC2-207ENST00000608532 PLD5Q8N7P1 536 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms