RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FSD1LQ9BXM9 530 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 OSBPL1AQ9BXW6 950 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 DPH5Q9H2P9 285 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 SUV39H2Q9H5I1 410 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 FBRSQ9HAH7 460 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 PIH1D1Q9NWS0 290 aaKnown RBP7.75□□□□□ -1.17
MSH6-211ENST00000606499 BCCIPQ9P287 314 aaKnown RBP eCLIP7.75□□□□□ -1.17
MSH6-211ENST00000606499 FAM153AQ9UHL3 310 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 FEZ2Q9UHY8 353 aaPredicted RBP7.75□□□□□ -1.17
MSH6-211ENST00000606499 CHKBQ9Y259 395 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 ITM2BQ9Y287 266 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 PCDHB9Q9Y5E1 797 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 USP34Q70CQ2 3546 aa7.75□□□□□ -1.17
MSH6-211ENST00000606499 ZNF106Q9H2Y7 1883 aaKnown RBP7.75□□□□□ -1.17
MSH6-211ENST00000606499 LRRK1Q38SD2 2015 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 A0A0U1RQS6 177 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 A0A1W2PP55 124 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 TCRBV7S3A2A0A539 114 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ESYT3A0FGR9 886 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 TSPAN11A1L157 253 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 FAM187AA6NFU0 413 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 C16orf96A6NNT2 1141 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 EFCAB8A8MWE9 144 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 E7EVH7 732 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 DNALI1O14645 258 aaPredicted RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 RIOK3O14730 519 aaKnown RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 SPINT1O43278 529 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 HTRA2O43464 458 aaPredicted RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 FZD6O60353 706 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 RNASEH2AO75792 299 aaKnown RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 ALDH1A2O94788 518 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 HEXIM1O94992 359 aaKnown RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 PGLSO95336 258 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 PAPSS2O95340 614 aaPredicted RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 AP2A1O95782 977 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 AGTP01019 485 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 PRLP01236 227 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ALPIP09923 528 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ATXN1LP0C7T5 689 aaKnown RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 PIRTP0C851 137 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 CTPS1P17812 591 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ITIH2P19823 946 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 C5AR1P21730 350 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 CA4P22748 312 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ITGB7P26010 798 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 IVDP26440 423 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ADRA1AP35348 466 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 FDFT1P37268 417 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 P2RY2P41231 377 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 GRIA1P42261 906 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ABL2P42684 1182 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 RPL21P46778 160 aaKnown RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 LMAN1P49257 510 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 SEMG2Q02383 582 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 CDK18Q07002 472 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 CNTN1Q12860 1018 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 MPP3Q13368 585 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 MTM1Q13496 603 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 KCNJ11Q14654 390 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 GRM3Q14832 879 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 SLC14A2Q15849 920 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 SIRPB2Q5JXA9 342 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 TEX35Q5T0J7 233 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ARMC12Q5T9G4 340 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 FAM46CQ5VWP2 391 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 IZUMO3Q5VZ72 239 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 FAM124AQ86V42 546 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 RASSF3Q86WH2 238 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 MAML2Q8IZL2 1156 aaPredicted RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 HDDC3Q8N4P3 179 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 SLC25A41Q8N5S1 370 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 DTWD2Q8NBA8 298 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 GANCQ8TET4 914 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 CPT1BQ92523 772 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 IFT43Q96FT9 208 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 PPP1R16AQ96I34 528 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 LRIG1Q96JA1 1093 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 FEM1CQ96JP0 617 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ZNF641Q96N77 438 aaPredicted RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 PPP1R2P1Q96PQ5 205 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 TBL1YQ9BQ87 522 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 ERP44Q9BS26 406 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 PABPC3Q9H361 631 aaKnown RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 LRRC40Q9H9A6 602 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 DYRK4Q9NR20 520 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 PRMT8Q9NR22 394 aaPredicted RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 VPS45Q9NRW7 570 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 EBF1Q9UH73 591 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 GGT7Q9UJ14 662 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 AAR2Q9Y312 384 aaKnown RBP7.74□□□□□ -1.17
MSH6-211ENST00000606499 PLXNA2O75051 1894 aa7.74□□□□□ -1.17
MSH6-211ENST00000606499 LOC285095A0A1B0GVY8 99 aa7.73□□□□□ -1.17
MSH6-211ENST00000606499 GOLGA6CA6NDK9 693 aa7.73□□□□□ -1.17
MSH6-211ENST00000606499 GOLGA6BA6NDN3 693 aa7.73□□□□□ -1.17
MSH6-211ENST00000606499 CAPN8A6NHC0 703 aa7.73□□□□□ -1.17
MSH6-211ENST00000606499 NPIPB15A6NHN6 443 aaPredicted RBP7.73□□□□□ -1.17
MSH6-211ENST00000606499 A8MX80 341 aa7.73□□□□□ -1.17
MSH6-211ENST00000606499 UPK3BL1B0FP48 263 aa7.73□□□□□ -1.17
MSH6-211ENST00000606499 UPK3BL2E5RIL1 263 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms