RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 TBC1D3HP0C7X1 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 THEGLP0DJG4 465 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 PABPC1P11940 636 aaKnown RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 UNGP13051 313 aaPredicted RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 GOT1P17174 413 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 ADPRHP54922 357 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 STAT4Q14765 748 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 ASIC2Q16515 512 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBR1Q16650 682 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 C9orf64Q5T6V5 341 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 NAA35Q5VZE5 725 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 SPECC1LQ69YQ0 1117 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3GQ6DHY5 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3CQ6IPX1 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 SND1Q7KZF4 910 aaKnown RBP eCLIP12.46□□□□□ -0.411e-7■■■■□ 26.2
HLA-F-230ENST00000606273 ZNF571Q7Z3V5 609 aaPredicted RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 PRPF39Q86UA1 669 aaKnown RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 DNAAF5Q86Y56 855 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3Q8IZP1 549 aaPredicted RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 SIX6OS1Q8N1H7 587 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 SCML4Q8N228 414 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 AADATQ8N5Z0 425 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 OR14C36Q8NHC7 312 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 SLC30A5Q8TAD4 765 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 MAPK15Q8TD08 544 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 EDEM1Q92611 657 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TMA16Q96EY4 203 aaKnown RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 PPP1R13BQ96KQ4 1090 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 AGPAT1Q99943 283 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 KRTAP9-2Q9BYQ4 174 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 EDEM3Q9BZQ6 932 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 HAUS4Q9H6D7 363 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 CNGB3Q9NQW8 809 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TAS2R14Q9NYV8 317 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 SRPK3Q9UPE1 567 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 U3KQA8 63 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 PLXNA2O75051 1894 aa12.46□□□□□ -0.42
HLA-F-230ENST00000606273 AHCTF1Q8WYP5 2266 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.45□□□□□ -0.42
HLA-F-230ENST00000606273 POLR2EP19388 210 aaKnown RBP12.45□□□□□ -0.42
HLA-F-230ENST00000606273 PRKCIP41743 596 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 PPP2CBP62714 309 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 PPP2CAP67775 309 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 ZBED6P86452 979 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 PTP4A2Q12974 167 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 TBX2Q13207 712 aaPredicted RBP12.45□□□□□ -0.42
HLA-F-230ENST00000606273 HNRNPA1L2Q32P51 320 aaKnown RBP12.45□□□□□ -0.42
HLA-F-230ENST00000606273 BSPRYQ5W0U4 402 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 FAM183BPQ6ZVS7 135 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 ZNF438Q7Z4V0 828 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 PHLDB2Q86SQ0 1253 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 ZNF677Q86XU0 584 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 TMEM35BQ8NCS4 154 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 CDK5RAP1Q96SZ6 601 aaKnown RBP12.45□□□□□ -0.42
HLA-F-230ENST00000606273 FAM129BQ96TA1 746 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 EPN3Q9H201 632 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 PDCL3Q9H2J4 239 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 CAAP1Q9H8G2 361 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 USP29Q9HBJ7 922 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 LRRC4CQ9HCJ2 640 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 KLHL11Q9NVR0 708 aa12.45□□□□□ -0.42
HLA-F-230ENST00000606273 GEMIN8Q9NWZ8 242 aaKnown RBP12.45□□□□□ -0.42
HLA-F-230ENST00000606273 DDX3XO00571 662 aaKnown RBP eCLIP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 LTFP02788 710 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 TPM3P06753 285 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 EPHA1P21709 976 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 CD70P32970 193 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 ACADSBP45954 432 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 ADKP55263 362 aaKnown RBP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 PITX1P78337 314 aaPredicted RBP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 SRSF6Q13247 344 aaKnown RBP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 TGIF1Q15583 401 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 CLEC16AQ2KHT3 1053 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 SYPL2Q5VXT5 272 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 WDR59Q6PJI9 974 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 OLFML1Q6UWY5 402 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 MMS22LQ6ZRQ5 1243 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 PTRH1Q86Y79 214 aaKnown RBP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 WDR36Q8NI36 951 aaKnown RBP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 IFI44Q8TCB0 444 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 IRGQQ8WZA9 623 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 TTC17Q96AE7 1141 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 KLHDC7BQ96G42 594 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 NLGN3Q9NZ94 848 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 MARCH2Q9P0N8 246 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 NAALADL1Q9UQQ1 740 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 DMTF1Q9Y222 760 aa12.44□□□□□ -0.42
HLA-F-230ENST00000606273 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.44□□□□□ -0.42
HLA-F-230ENST00000606273 NOTCH2Q04721 2471 aa12.43□□□□□ -0.42
HLA-F-230ENST00000606273 SLC12A8A0AV02 714 aa12.43□□□□□ -0.42
HLA-F-230ENST00000606273 TARSL2A2RTX5 802 aaKnown RBP12.43□□□□□ -0.42
HLA-F-230ENST00000606273 GRAP2O75791 330 aa12.43□□□□□ -0.42
HLA-F-230ENST00000606273 FBXO21O94952 628 aa12.43□□□□□ -0.42
HLA-F-230ENST00000606273 LSM8O95777 96 aaKnown RBP12.43□□□□□ -0.42
HLA-F-230ENST00000606273 ITGA2BP08514 1039 aa12.43□□□□□ -0.42
HLA-F-230ENST00000606273 ALPPL2P10696 532 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms