RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 DGKKQ5KSL6 1271 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 MBLAC2Q68D91 279 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 CES3Q6UWW8 571 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 ANKRD42Q8N9B4 389 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 ACDQ96AP0 544 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 VOPP1Q96AW1 172 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 KCNK9Q9NPC2 374 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 EURLQ9NYK6 297 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 SLCO3A1Q9UIG8 710 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 CCDC78A2IDD5 438 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 ARNTLO00327 626 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 MGRN1O60291 552 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 ATXN1LP0C7T5 689 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 SLC12A1Q13621 1099 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 GALNT3Q14435 633 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 PDGFRLQ15198 375 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 NAPEPLDQ6IQ20 393 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 RETSATQ6NUM9 610 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 RANBP10Q6VN20 620 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 UNC5AQ6ZN44 842 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 CEP128Q6ZU80 1094 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 UNC5BQ8IZJ1 945 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 ATP11CQ8NB49 1132 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 STAMBPL1Q96FJ0 436 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 EBNA1BP2Q99848 306 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 THG1LQ9NWX6 298 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 ZC3H7BQ9UGR2 993 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 ACTL7BQ9Y614 415 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 MYLKQ15746 1914 aa17.51■□□□□ 0.39
PPFIA3-207ENST00000602716 C2CD4DB7Z1M9 353 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 ATP9BO43861 1147 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 SOX9P48436 509 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 ELF3P78545 371 aaPredicted RBP17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 SARNPP82979 210 aaKnown RBP17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 TRAF2Q12933 501 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 SKIV2LQ15477 1246 aaKnown RBP17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 CASC4Q6P4E1 433 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 BBS5Q8N3I7 341 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 MAGEC3Q8TD91 643 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 MRGPRX3Q96LB0 322 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 NUDCD1Q96RS6 583 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 CCDC77Q9BR77 488 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 SCUBE2Q9NQ36 999 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 VPS45Q9NRW7 570 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 IL1RAPL1Q9NZN1 696 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 EPS15L1Q9UBC2 864 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 HS3ST2Q9Y278 367 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 PCDHGC4Q9Y5F7 938 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 PRRT4C9JH25 899 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 C1QAP02745 245 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 OPRD1P41143 372 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 CDH17Q12864 832 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 RUNX3Q13761 415 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 C22orf39Q6P5X5 142 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 TRMT10BQ6PF06 316 aaKnown RBP17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 YAF2Q8IY57 180 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 AHI1Q8N157 1196 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 PHTF2Q8N3S3 785 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 ZNF778Q96MU6 729 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 NECTIN4Q96NY8 510 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 TRIB3Q96RU7 358 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 MTG2Q9H4K7 406 aa17.5■□□□□ 0.39
PPFIA3-207ENST00000602716 TCRBV9S1A1TA0A576 114 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 SDR42E2A6NKP2 422 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 MBTPS2O43462 519 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 ECI2O75521 394 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 PDHA1P08559 390 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 GJA4P35212 333 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 POU6F1Q14863 301 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 PTPRRQ15256 657 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 GALNTL6Q49A17 601 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 SIRPB2Q5JXA9 342 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 CCDC63Q8NA47 563 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 GDAP1Q8TB36 358 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 FBF1Q8TES7 1133 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 MYO19Q96H55 970 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 TTC25Q96NG3 672 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 TDRD1Q9BXT4 1180 aaKnown RBP17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 SLC2A11Q9BYW1 496 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 CIPCQ9C0C6 399 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 SLC17A6Q9P2U8 582 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 TBK1Q9UHD2 729 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 EVLQ9UI08 416 aaPredicted RBP17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 CHKBQ9Y259 395 aa17.49■□□□□ 0.39
PPFIA3-207ENST00000602716 ANHXE9PGG2 379 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 BNIP3LO60238 219 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 PIGNO95427 931 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 PRLP01236 227 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 SERPINF2P08697 491 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 PIRTP0C851 137 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 GCAP28676 217 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 ECT2LQ008S8 904 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 MSLNQ13421 630 aaPredicted RBP17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 SLC1A5Q15758 541 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 PTPRNQ16849 979 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 NCEH1Q6PIU2 408 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 C3orf62Q6ZUJ4 267 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 CCDC91Q7Z6B0 441 aa17.48■□□□□ 0.39
PPFIA3-207ENST00000602716 PALM2Q8IXS6 379 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms