RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 NFS1Q9Y697 457 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 RPS6KL1Q9Y6S9 549 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 HEATR9A2RTY3 570 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 SPECC1L-ADORA2AF8WAN1 911 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 PIGNO95427 931 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 ADRA1DP25100 572 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 EPHB1P54762 984 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 LAMB3Q13751 1172 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 SPANXN3Q5MJ09 141 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 CEP85LQ5SZL2 805 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 CAMK1DQ8IU85 385 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 GOLGA6L1Q8N7Z2 621 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 OR2A12Q8NGT7 310 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 FBF1Q8TES7 1133 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 RANBP9Q96S59 729 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 KIFC1Q9BW19 673 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 MRM3Q9HC36 420 aaKnown RBP22.76■■□□□ 1.23
IRF3-228ENST00000601291 TCAF1Q9Y4C2 921 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 PCDHB9Q9Y5E1 797 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 MIA3Q5JRA6 1907 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 TICRRQ7Z2Z1 1910 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 TCRBV9S1A1TA0A576 114 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 GOLGA6L10A6NI86 522 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 WASH3PC4AMC7 463 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 OPA1O60313 960 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 FZD6O60353 706 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 USP1O94782 785 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 PGLSO95336 258 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 PRLP01236 227 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 CTHP32929 405 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 GALK1P51570 392 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 RPL26P61254 145 aaKnown RBP22.75■■□□□ 1.23
IRF3-228ENST00000601291 PFKPQ01813 784 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 ZNF844Q08AG5 666 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 SEPT6Q14141 434 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 ZNF234Q14588 700 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 CRYMQ14894 314 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 KLHL38Q2WGJ6 581 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 PKN3Q6P5Z2 889 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 TMEM135Q86UB9 458 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 RALGPS2Q86X27 583 aaPredicted RBP22.75■■□□□ 1.23
IRF3-228ENST00000601291 ZNF669Q96BR6 464 aaPredicted RBP22.75■■□□□ 1.23
IRF3-228ENST00000601291 PKNOX2Q96KN3 472 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 HEPHQ9BQS7 1158 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 ACSS3Q9H6R3 686 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 CHRAC1Q9NRG0 131 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 RPL26L1Q9UNX3 145 aaKnown RBP22.75■■□□□ 1.23
IRF3-228ENST00000601291 PIAS3Q9Y6X2 628 aa22.75■■□□□ 1.23
IRF3-228ENST00000601291 EDDM13A0A1B0GTR0 161 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 EXOC1LA0A1B0GW35 172 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 TRAFD1O14545 582 aaPredicted RBP22.74■■□□□ 1.23
IRF3-228ENST00000601291 HTRA2O43464 458 aaPredicted RBP22.74■■□□□ 1.23
IRF3-228ENST00000601291 ASGR2P07307 311 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 PDHA1P08559 390 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 GKP32189 559 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 GRIA4P48058 902 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 SERPINA13PQ6UXR4 307 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 ZNF641Q96N77 438 aaPredicted RBP22.74■■□□□ 1.23
IRF3-228ENST00000601291 CYTH2Q99418 400 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 TRIM56Q9BRZ2 755 aaKnown RBP22.74■■□□□ 1.23
IRF3-228ENST00000601291 ROPN1BQ9BZX4 212 aaPredicted RBP22.74■■□□□ 1.23
IRF3-228ENST00000601291 PPCSQ9HAB8 311 aa22.74■■□□□ 1.23
IRF3-228ENST00000601291 ROPN1Q9HAT0 212 aaPredicted RBP22.74■■□□□ 1.23
IRF3-228ENST00000601291 A0A1W2PQ67 120 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 ANKRD66B4E2M5 251 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 AGPSO00116 658 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 IL9P15248 144 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 TNFRSF4P43489 277 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 HNRNPA1L2Q32P51 320 aaKnown RBP22.73■■□□□ 1.23
IRF3-228ENST00000601291 HSP90B2PQ58FF3 399 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 NLRP9Q7RTR0 991 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 MTERF4Q7Z6M4 381 aaKnown RBP22.73■■□□□ 1.23
IRF3-228ENST00000601291 SFTPA1Q8IWL2 248 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.73■■□□□ 1.23
IRF3-228ENST00000601291 BLOC1S5Q8TDH9 187 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 LRIG1Q96JA1 1093 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 TMEM109Q9BVC6 243 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 THAP10Q9P2Z0 257 aaPredicted RBP22.73■■□□□ 1.23
IRF3-228ENST00000601291 PRKAG3Q9UGI9 489 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 RABGEF1Q9UJ41 708 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 MUC22E2RYF6 1773 aaPredicted RBP22.73■■□□□ 1.23
IRF3-228ENST00000601291 C5orf42Q9H799 3197 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 COL4A2P08572 1712 aa22.73■■□□□ 1.23
IRF3-228ENST00000601291 MSLNQ13421 630 aaPredicted RBP22.72■■□□□ 1.23
IRF3-228ENST00000601291 KRT71Q3SY84 523 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 ANKRD20A4Q4UJ75 823 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 CYS1Q717R9 158 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 CHST14Q8NCH0 376 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 MAFAQ8NHW3 353 aaPredicted RBP22.72■■□□□ 1.23
IRF3-228ENST00000601291 PTPRN2Q92932 1015 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 MSANTD3Q96H12 275 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 OSBPL1AQ9BXW6 950 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 TMEM245Q9H330 911 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 SUV39H2Q9H5I1 410 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 PLAC1Q9HBJ0 212 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 HEBP1Q9NRV9 189 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 IL36AQ9UHA7 158 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 STARD13Q9Y3M8 1113 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 XIRP2A4UGR9 3374 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 RASGRF2O14827 1237 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms