RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TMEM131Q92545 1883 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 ANKRD36A6QL64 1941 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-204ENST00000597724 H0Y8X5 98 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 DFNA5O60443 496 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 PAK4O96013 591 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-204ENST00000597724 ZFXP17010 805 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-204ENST00000597724 MX2P20592 715 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 XPAP23025 273 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-204ENST00000597724 AKT2P31751 481 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 CDKN2BP42772 138 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 GSDMDP57764 484 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 FGL2Q14314 439 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 RALGPS1Q5JS13 557 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 CFAP58Q5T655 872 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 TIGD7Q6NT04 549 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-204ENST00000597724 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-204ENST00000597724 ASB12Q8WXK4 309 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 LENG8Q96PV6 779 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-204ENST00000597724 MYOCQ99972 504 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 NOD2Q9HC29 1040 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 NT5MQ9NPB1 228 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 FZD3Q9NPG1 666 aa16.88■□□□□ 0.29
SSBP4-204ENST00000597724 PCNX2A6NKB5 2137 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 APOL1O14791 398 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 MAGEC1O60732 1142 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 MMP20O60882 483 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 CEACAM1P13688 526 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 MARCKSL1P49006 195 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 MAXP61244 160 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 POLR2LP62875 67 aaKnown RBP16.87■□□□□ 0.29
SSBP4-204ENST00000597724 ELP6Q0PNE2 266 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 SGCGQ13326 291 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 TMEM52BQ4KMG9 183 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 PRAMEF14Q5SWL7 426 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 DBX2Q6ZNG2 339 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 GCNT7Q6ZNI0 430 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 RFX6Q8HWS3 928 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 KATNAL2Q8IYT4 538 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 CCNYQ8ND76 341 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 SPOCK2Q92563 424 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 HDAC11Q96DB2 347 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 ELF4Q99607 663 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-204ENST00000597724 KLF6Q99612 283 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-204ENST00000597724 DESI2Q9BSY9 194 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 ERVMER34-1Q9H9K5 563 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 PCDH12Q9NPG4 1184 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 SCUBE2Q9NQ36 999 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 GDF3Q9NR23 364 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 AMACRQ9UHK6 382 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 HEY1Q9Y5J3 304 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 HS3ST3A1Q9Y663 406 aa16.87■□□□□ 0.29
SSBP4-204ENST00000597724 TP53BP1Q12888 1972 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-204ENST00000597724 NCOR2Q9Y618 2525 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 RIOK3O14730 519 aaKnown RBP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 GIPC1O14908 333 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 RAD51BO15315 384 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 HTRA2O43464 458 aaPredicted RBP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 SOCS5O75159 536 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 ZRANB2O95218 330 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■■□ 22.3
SSBP4-204ENST00000597724 CCNB1P14635 433 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 NAP1L1P55209 391 aaKnown RBP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 CLDN2P57739 230 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 PPIDQ08752 370 aaKnown RBP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 ALG1LQ6GMV1 187 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 PSAPL1Q6NUJ1 521 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 NPNTQ6UXI9 565 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 SPOCD1Q6ZMY3 1216 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 ABI3BPQ7Z7G0 1075 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 SPATS2Q86XZ4 545 aaKnown RBP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 CCDC13Q8IYE1 715 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 RCOR2Q8IZ40 523 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 DEFB124Q8NES8 71 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 FAM174AQ8TBP5 190 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 KIAA1524Q8TCG1 905 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 CXorf40AQ8TE69 158 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 LRRN4Q8WUT4 740 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 KRT35Q92764 455 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 KLHDC7BQ96G42 594 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 BMFQ96LC9 184 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 LGMNQ99538 433 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 SLC32A1Q9H598 525 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 RBM22Q9NW64 420 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 ATP8A1Q9Y2Q0 1164 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSBP4-204ENST00000597724 PCDHGC4Q9Y5F7 938 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 PCDHGB2Q9Y5G2 931 aa16.86■□□□□ 0.29
SSBP4-204ENST00000597724 A0A1B0GTQ1 180 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 POM121BA6NF01 834 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 SH3BP5O60239 455 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 THEGLP0DJG4 465 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 KRT10P13645 584 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 CES1P23141 567 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 CTNNA1P35221 906 aaKnown RBP16.85■□□□□ 0.29
SSBP4-204ENST00000597724 CCT8P50990 548 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 NOVA1P51513 510 aaKnown RBP16.85■□□□□ 0.29
SSBP4-204ENST00000597724 DYNLT1P63172 113 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 FOXK2Q01167 660 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms