RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 LMX1AQ8TE12 382 aa15.33■□□□□ 0.04
TGFB1-202ENST00000597453 ARHGEF26Q96DR7 871 aa15.33■□□□□ 0.04
TGFB1-202ENST00000597453 DNAJC7Q99615 494 aa15.33■□□□□ 0.04
TGFB1-202ENST00000597453 WRAP53Q9BUR4 548 aaKnown RBP15.33■□□□□ 0.04
TGFB1-202ENST00000597453 TRIM5Q9C035 493 aa15.33■□□□□ 0.04
TGFB1-202ENST00000597453 CATSPERBQ9H7T0 1116 aa15.33■□□□□ 0.04
TGFB1-202ENST00000597453 PDFQ9HBH1 243 aa15.33■□□□□ 0.04
TGFB1-202ENST00000597453 MBNL1Q9NR56 388 aaKnown RBP15.33■□□□□ 0.04
TGFB1-202ENST00000597453 MFHAS1Q9Y4C4 1052 aa15.33■□□□□ 0.04
TGFB1-202ENST00000597453 BPTFQ12830 3046 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 TMCO5BA8MYB1 307 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 FGF10O15520 208 aaPredicted RBP15.32■□□□□ 0.04
TGFB1-202ENST00000597453 ATMINO43313 823 aaPredicted RBP15.32■□□□□ 0.04
TGFB1-202ENST00000597453 AQP9O43315 295 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 FTLP02792 175 aaPredicted RBP15.32■□□□□ 0.04
TGFB1-202ENST00000597453 AIF1P55008 147 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 MAMLD1Q13495 774 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 CDKN3Q16667 212 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 CA9Q16790 459 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 DEFB133Q30KQ1 61 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 ZCCHC8Q6NZY4 707 aaKnown RBP15.32■□□□□ 0.04
TGFB1-202ENST00000597453 ARFGAP1Q8N6T3 406 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 TP53I13Q8NBR0 393 aaPredicted RBP15.32■□□□□ 0.04
TGFB1-202ENST00000597453 SNIP1Q8TAD8 396 aaKnown RBP15.32■□□□□ 0.04
TGFB1-202ENST00000597453 IFI44Q8TCB0 444 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 TRIM11Q96F44 468 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 DUSP23Q9BVJ7 150 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 ISCUQ9H1K1 167 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 LRRC19Q9H756 370 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 DKK3Q9UBP4 350 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 CSNK1G3Q9Y6M4 447 aa15.32■□□□□ 0.04
TGFB1-202ENST00000597453 KIF26BQ2KJY2 2108 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 J3KR12 359 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 MFAP3LO75121 409 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 TM7SF2O76062 418 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 GP1BAP07359 652 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 MYBL1P10243 752 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 PSMA2P25787 234 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 THOP1P52888 689 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 TPI1P60174 286 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 RAD51Q06609 339 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 C1orf61Q13536 156 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 PLEKHA7Q6IQ23 1121 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 GUSBP11Q6P575 273 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 PHACTR4Q8IZ21 702 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 OR8K1Q8NGG5 319 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 CXorf40AQ8TE69 158 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 CELF6Q96J87 481 aaKnown RBP15.31■□□□□ 0.04
TGFB1-202ENST00000597453 PEBP4Q96S96 227 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.31■□□□□ 0.04
TGFB1-202ENST00000597453 LRRC61Q9BV99 259 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 CPEB1Q9BZB8 566 aaKnown RBP15.31■□□□□ 0.04
TGFB1-202ENST00000597453 TRIM7Q9C029 511 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 USP29Q9HBJ7 922 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 PARVAQ9NVD7 372 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 UBA2Q9UBT2 640 aaPredicted RBP15.31■□□□□ 0.04
TGFB1-202ENST00000597453 APOBEC3BQ9UH17 382 aaKnown RBP15.31■□□□□ 0.04
TGFB1-202ENST00000597453 AP4E1Q9UPM8 1137 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 COQ6Q9Y2Z9 468 aa15.31■□□□□ 0.04
TGFB1-202ENST00000597453 TSPAN11A1L157 253 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 CPED1A4D0V7 1026 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 PRAMEF11O60813 436 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 CSO75390 466 aaKnown RBP15.3■□□□□ 0.04
TGFB1-202ENST00000597453 GCATO75600 419 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 MPOP05164 745 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 RGRP47804 291 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 DUSP3P51452 185 aaPredicted RBP15.3■□□□□ 0.04
TGFB1-202ENST00000597453 TBX2Q13207 712 aaPredicted RBP15.3■□□□□ 0.04
TGFB1-202ENST00000597453 IRF4Q15306 451 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 TBC1D25Q3MII6 688 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 TMEM52BQ4KMG9 183 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 NYAP1Q6ZVC0 841 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 EFL1Q7Z2Z2 1120 aaKnown RBP15.3■□□□□ 0.04
TGFB1-202ENST00000597453 ZSWIM9Q86XI8 627 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 MAPK15Q8TD08 544 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 FGF11Q92914 225 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 ZNF653Q96CK0 615 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 DEPDC7Q96QD5 511 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 NCAPGQ9BPX3 1015 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 SNRNP25Q9BV90 132 aaKnown RBP15.3■□□□□ 0.04
TGFB1-202ENST00000597453 SLC39A8Q9C0K1 460 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 DHX35Q9H5Z1 703 aaKnown RBP15.3■□□□□ 0.04
TGFB1-202ENST00000597453 ABHD10Q9NUJ1 306 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 ZNHIT6Q9NWK9 470 aaKnown RBP15.3■□□□□ 0.04
TGFB1-202ENST00000597453 PCSK1NQ9UHG2 260 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 SALL4Q9UJQ4 1053 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 RAI2Q9Y5P3 530 aa15.3■□□□□ 0.04
TGFB1-202ENST00000597453 A0A087X0T9 212 aa15.29■□□□□ 0.04
TGFB1-202ENST00000597453 EEF2KO00418 725 aaKnown RBP15.29■□□□□ 0.04
TGFB1-202ENST00000597453 TPP1O14773 563 aa15.29■□□□□ 0.04
TGFB1-202ENST00000597453 CASC3O15234 703 aaKnown RBP15.29■□□□□ 0.04
TGFB1-202ENST00000597453 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
TGFB1-202ENST00000597453 PRKCGP05129 697 aa15.29■□□□□ 0.04
TGFB1-202ENST00000597453 CELA2BP08218 269 aaPredicted RBP15.29■□□□□ 0.04
TGFB1-202ENST00000597453 FAM228BP0C875 321 aa15.29■□□□□ 0.04
TGFB1-202ENST00000597453 TGM2P21980 687 aa15.29■□□□□ 0.04
TGFB1-202ENST00000597453 HTR7P34969 479 aa15.29■□□□□ 0.04
TGFB1-202ENST00000597453 ACTN2P35609 894 aa15.29■□□□□ 0.04
TGFB1-202ENST00000597453 EIF4A3P38919 411 aaKnown RBP15.29■□□□□ 0.04
TGFB1-202ENST00000597453 PAPOLAP51003 745 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms