RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TERB1Q8NA31 727 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 USP33Q8TEY7 942 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 UCMAQ8WVF2 138 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 CASKIN2Q8WXE0 1202 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 UBXN4Q92575 508 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 MAML1Q92585 1016 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 EZH1Q92800 747 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 LMLNQ96KR4 655 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 P2RY13Q9BPV8 354 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 RHOXF2Q9BQY4 288 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 TRIM51Q9BSJ1 452 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 CEP41Q9BYV8 373 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 PDFQ9HBH1 243 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 USP29Q9HBJ7 922 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 CAPN10Q9HC96 672 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 POLMQ9NP87 494 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 RBM22Q9NW64 420 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 SEPT3Q9UH03 358 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 PILRBQ9UKJ0 227 aa12.22□□□□□ -0.45
SHKBP1-213ENST00000597325 MUC22E2RYF6 1773 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 CXorf51AA0A1B0GTR3 108 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 TBC1D3BA6NDS4 549 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 C5orf60A6NFR6 353 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 CAPN8A6NHC0 703 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 NDC80O14777 642 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 TIMM44O43615 452 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 SH3BP5O60239 455 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 GCATO75600 419 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 GJB3O75712 270 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 HEXIM1O94992 359 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 KAT7O95251 611 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 CISD3P0C7P0 127 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ADCY8P40145 1251 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 NNMTP40261 264 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 GRIA2P42262 883 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 SERPINH1P50454 418 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ST8SIA6P61647 398 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ECT2LQ008S8 904 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ITKQ08881 620 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 WASHC5Q12768 1159 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 GPS1Q13098 491 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ZBTB17Q13105 803 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 E2F5Q15329 346 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 GEN1Q17RS7 908 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 TEX44Q53QW1 395 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ANKRD20A2Q5SQ80 823 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ANKRD20A1Q5TYW2 823 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ANKRD20A3Q5VUR7 823 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 PID1Q7Z2X4 250 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ADIPOR2Q86V24 386 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 MINDY1Q8N5J2 469 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 CCDC110Q8TBZ0 833 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 LRRC45Q96CN5 670 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 AGAP3Q96P47 875 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 PPP1R2P1Q96PQ5 205 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 LRRC1Q9BTT6 524 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 NT5MQ9NPB1 228 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 DNAAF2Q9NVR5 837 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 RSPH14Q9UHP6 348 aa12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 INTS6Q9UL03 887 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-213ENST00000597325 FLNCQ14315 2725 aa12.21□□□□□ -0.46
SHKBP1-213ENST00000597325 GOLGA4Q13439 2230 aaKnown RBP12.21□□□□□ -0.46
SHKBP1-213ENST00000597325 CHD5Q8TDI0 1954 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 PLXND1Q9Y4D7 1925 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 GOLGA6CA6NDK9 693 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 GOLGA6BA6NDN3 693 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 TRABD2BA6NFA1 517 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 E7EVH7 732 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 PYCARD-AS1I3L0S3 204 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 TRIM24O15164 1050 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 ZMPSTE24O75844 475 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 TMCC1O94876 653 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 HLA-DQB2P05538 268 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 DLDP09622 509 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 ZSCAN5DPP0CG00 497 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 GOLGA6DP0CG33 693 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 ETS1P14921 441 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 DRD1P21728 446 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 HOXD12P35452 270 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 RHOAP61586 193 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 BASP1P80723 227 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 MRPS25P82663 173 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 SLC7A5Q01650 507 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 GUCY2DQ02846 1103 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 SLC10A7Q0GE19 358 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 PRPSAP1Q14558 356 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 FBXO43Q4G163 708 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 INO80DQ53TQ3 878 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 GLRX5Q86SX6 157 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 ZNF567Q8N184 647 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 PHTF2Q8N3S3 785 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 TEX26Q8N6G2 289 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 BBOF1Q8ND07 529 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 OR2I1PQ8NGU4 316 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 TTC17Q96AE7 1141 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 TEKT5Q96M29 485 aa12.2□□□□□ -0.46
SHKBP1-213ENST00000597325 IL12RB2Q99665 862 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms