RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 RYBPQ8N488 228 aaPredicted RBP10.66□□□□□ -0.7
LIG1-210ENST00000596332 EID2BQ96D98 161 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 MRGPRX2Q96LB1 330 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 MCCC1Q96RQ3 725 aaPredicted RBP10.66□□□□□ -0.7
LIG1-210ENST00000596332 OSBPL1AQ9BXW6 950 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 GBA3Q9H227 469 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 EPC1Q9H2F5 836 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 SCUBE2Q9NQ36 999 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 FAM86C1Q9NVL1 165 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 UBP1Q9NZI7 540 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 TRHDEQ9UKU6 1024 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 ITM2BQ9Y287 266 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
LIG1-210ENST00000596332 RAI2Q9Y5P3 530 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 ABCA7Q8IZY2 2146 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 FRYLO94915 3013 aa10.66□□□□□ -0.7
LIG1-210ENST00000596332 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.65□□□□□ -0.7
LIG1-210ENST00000596332 METTL12A8MUP2 240 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 C1QTNF3-AMACRE9PGA6 284 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 F5H423 210 aaPredicted RBP10.65□□□□□ -0.7
LIG1-210ENST00000596332 WNT9AO14904 365 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 LATO43561 262 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 AP1G1O43747 822 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 SOCS5O75159 536 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 ATXN1LP0C7T5 689 aaKnown RBP10.65□□□□□ -0.7
LIG1-210ENST00000596332 MSNP26038 577 aaKnown RBP10.65□□□□□ -0.7
LIG1-210ENST00000596332 IVDP26440 423 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 PSMB4P28070 264 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 OXTRP30559 389 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 CNR2P34972 360 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 PTGER3P43115 390 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 BCL2L1Q07817 233 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 GRM3Q14832 879 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 TMEM52BQ4KMG9 183 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 PMS2CLQ68D20 193 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 RANBP10Q6VN20 620 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 DEFB119Q8N690 84 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 NSMCE1Q8WV22 266 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 MAIP1Q8WWC4 291 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 CAPZA3Q96KX2 299 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 CCDC114Q96M63 670 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 PRRX2Q99811 253 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 GPR174Q9BXC1 333 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 ATP13A3Q9H7F0 1226 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 SGK2Q9HBY8 427 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 PCDH12Q9NPG4 1184 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 ZNF148Q9UQR1 794 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 CHKBQ9Y259 395 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 PCDHB9Q9Y5E1 797 aa10.65□□□□□ -0.7
LIG1-210ENST00000596332 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 CFAP69A5D8W1 941 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 UPK3BL1B0FP48 263 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 UPK3BL2E5RIL1 263 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 PROB1E7EW31 1015 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 TP73O15350 636 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 SLC7A4O43246 635 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 OPHN1O60890 802 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 AGTP01019 485 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 ACADMP11310 421 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 TGM1P22735 817 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 LHCGRP22888 699 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 SERPINA4P29622 427 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 HNF1BP35680 557 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 MAPK8P45983 427 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 NEK3P51956 506 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 PTPN5P54829 565 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 WNT3AP56704 352 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 RAD51Q06609 339 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 ITKQ08881 620 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 QPCTQ16769 361 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 PARP6Q2NL67 630 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 ZNF284Q2VY69 593 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 P3H1Q32P28 736 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 SEL1L3Q68CR1 1132 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 BRAT1Q6PJG6 821 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 TTC7BQ86TV6 843 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 TMEFF1Q8IYR6 380 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 BBS5Q8N3I7 341 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 CADM4Q8NFZ8 388 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 OR2T34Q8NGX1 318 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 OR14C36Q8NHC7 312 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 ATL2Q8NHH9 583 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 DNASE2BQ8WZ79 361 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 MAGOHBQ96A72 148 aaKnown RBP10.64□□□□□ -0.71
LIG1-210ENST00000596332 BIRC7Q96CA5 298 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 TRIM44Q96DX7 344 aaPredicted RBP10.64□□□□□ -0.71
LIG1-210ENST00000596332 SCRN2Q96FV2 425 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 KLF6Q99612 283 aaPredicted RBP10.64□□□□□ -0.71
LIG1-210ENST00000596332 OMDQ99983 421 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 C1QTNF2Q9BXJ5 285 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 BTBD1Q9H0C5 482 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 ETNK1Q9HBU6 452 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
LIG1-210ENST00000596332 KLHL8Q9P2G9 620 aaPredicted RBP10.64□□□□□ -0.71
LIG1-210ENST00000596332 A0A0J9YYE9 177 aa10.63□□□□□ -0.71
LIG1-210ENST00000596332 NPIPB15A6NHN6 443 aaPredicted RBP10.63□□□□□ -0.71
LIG1-210ENST00000596332 ANKRD66B4E2M5 251 aa10.63□□□□□ -0.71
LIG1-210ENST00000596332 PHF2O75151 1096 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms