RNA–Protein interactions for RNA: ENST00000594693.5

ZNF548-204, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-204ENST00000594693 PCED1AQ9H1Q7 454 aa17.8■□□□□ 0.44
ZNF548-204ENST00000594693 EPC1Q9H2F5 836 aa17.8■□□□□ 0.44
ZNF548-204ENST00000594693 FADS3Q9Y5Q0 445 aa17.8■□□□□ 0.44
ZNF548-204ENST00000594693 FANCMQ8IYD8 2048 aa17.8■□□□□ 0.44
ZNF548-204ENST00000594693 SEMA4FO95754 770 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 MT-CYBP00156 380 aaPredicted RBP17.79■□□□□ 0.44
ZNF548-204ENST00000594693 PDHA1P08559 390 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 NBL1P41271 181 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 ABL2P42684 1182 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 KCNJ1P48048 391 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 RPL6Q02878 288 aaKnown RBP17.79■□□□□ 0.44
ZNF548-204ENST00000594693 PARP6Q2NL67 630 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 P3H1Q32P28 736 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 ARMC12Q5T9G4 340 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 ITPRIPL1Q6GPH6 555 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 NEK5Q6P3R8 708 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 CEP68Q76N32 757 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 ATL2Q8NHH9 583 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 MAGOHBQ96A72 148 aaKnown RBP17.79■□□□□ 0.44
ZNF548-204ENST00000594693 TDRD1Q9BXT4 1180 aaKnown RBP17.79■□□□□ 0.44
ZNF548-204ENST00000594693 GBA3Q9H227 469 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 SEMA4AQ9H3S1 761 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 VPS45Q9NRW7 570 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 FAM153AQ9UHL3 310 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 RSPH14Q9UHP6 348 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 PHTF1Q9UMS5 762 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 PPIL1Q9Y3C6 166 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 PCDHB9Q9Y5E1 797 aa17.79■□□□□ 0.44
ZNF548-204ENST00000594693 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 LRRC72A6NJI9 287 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 METTL12A8MUP2 240 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 UPK3BL1B0FP48 263 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 UPK3BL2E5RIL1 263 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 KIF2AO00139 706 aaPredicted RBP17.78■□□□□ 0.44
ZNF548-204ENST00000594693 PDE2AO00408 941 aaPredicted RBP17.78■□□□□ 0.44
ZNF548-204ENST00000594693 SPINT1O43278 529 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 RHOBTB1O94844 696 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 ITIH2P19823 946 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 RPL26P61254 145 aaKnown RBP17.78■□□□□ 0.44
ZNF548-204ENST00000594693 CFAP58Q5T655 872 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 PMS2CLQ68D20 193 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 TTC27Q6P3X3 843 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 KDELC1Q6UW63 502 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 LPCAT2Q7L5N7 544 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 KLHDC8BQ8IXV7 354 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 TMEFF1Q8IYR6 380 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 OXNAD1Q96HP4 312 aaPredicted RBP17.78■□□□□ 0.44
ZNF548-204ENST00000594693 CAPZA3Q96KX2 299 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 TRIB3Q96RU7 358 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 GORASP1Q9BQQ3 440 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 C6orf106Q9H6K1 298 aaPredicted RBP17.78■□□□□ 0.44
ZNF548-204ENST00000594693 PREBQ9HCU5 417 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 RPL26L1Q9UNX3 145 aaKnown RBP17.78■□□□□ 0.44
ZNF548-204ENST00000594693 CHKBQ9Y259 395 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 MUC6Q6W4X9 2439 aa17.78■□□□□ 0.44
ZNF548-204ENST00000594693 EML5Q05BV3 1969 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3DA0A087WVF3 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3IA0A087WXS9 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3EA0A087X179 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3KA0A087X1G2 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3FA6NER0 549 aaPredicted RBP17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3LB9A6J9 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 RIOK3O14730 519 aaKnown RBP17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TSPAN6O43657 245 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 EPOP01588 193 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3HP0C7X1 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 CA4P22748 312 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 COILP38432 576 aaPredicted RBP17.77■□□□□ 0.44
ZNF548-204ENST00000594693 PAFAH1B1P43034 410 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3GQ6DHY5 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3CQ6IPX1 549 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 SLC41A1Q8IVJ1 513 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 TBC1D3Q8IZP1 549 aaPredicted RBP17.77■□□□□ 0.44
ZNF548-204ENST00000594693 DEFB119Q8N690 84 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 PDCD6IPQ8WUM4 868 aaKnown RBP17.77■□□□□ 0.44
ZNF548-204ENST00000594693 PCDH9Q9HC56 1237 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 PCDH12Q9NPG4 1184 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 UBP1Q9NZI7 540 aa17.77■□□□□ 0.44
ZNF548-204ENST00000594693 GOLGA6L10A0A0M3HER8 536 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 LOC285095A0A1B0GVY8 99 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 FAM47DPA6NHR8 397 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 PHF2O75151 1096 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 PMPCBO75439 489 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 ANXA9O76027 345 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 METTL18O95568 372 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 IFNB1P01574 187 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 IGHV4-34P06331 123 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 ETS1P14921 441 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 XPAP23025 273 aaPredicted RBP17.76■□□□□ 0.43
ZNF548-204ENST00000594693 PSMB4P28070 264 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 CCR5P51681 352 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 WNT3AP56704 352 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 LMNB2Q03252 620 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 CDK18Q07002 472 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 MPP3Q13368 585 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 PRPSAP1Q14558 356 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 ELF2Q15723 593 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 TMEM52BQ4KMG9 183 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 LRRC73Q5JTD7 316 aa17.76■□□□□ 0.43
ZNF548-204ENST00000594693 KIAA0895LQ68EN5 471 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms