RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ETNK2Q9NVF9 386 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 KLHL11Q9NVR0 708 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 ITM2BQ9Y287 266 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 NEMP2A6NFY4 417 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 HYAL3O43820 417 aaPredicted RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 LZTS3O60299 673 aaPredicted RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 CYLC1P35663 651 aaPredicted RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 MAGEA1P43355 309 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 MMP13P45452 471 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 NOP2P46087 812 aaKnown RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 ITKQ08881 620 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 BNIP3Q12983 259 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 MMRN1Q13201 1228 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 DPYSL3Q14195 570 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 ATP13A4Q4VNC1 1196 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 CCDC157Q569K6 752 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 RALGPS1Q5JS13 557 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 GCNT7Q6ZNI0 430 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 CHCHD4Q8N4Q1 142 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 BAHD1Q8TBE0 780 aaPredicted RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 FAM71BQ8TC56 605 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 ADAMTS14Q8WXS8 1223 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 RFFLQ8WZ73 363 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 CNDP2Q96KP4 475 aaKnown RBP17.51■□□□□ 0.39
IRF3-208ENST00000594387 DNAJC28Q9NX36 388 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 GGT7Q9UJ14 662 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 NEUROG3Q9Y4Z2 214 aa17.51■□□□□ 0.39
IRF3-208ENST00000594387 LAMA1P25391 3075 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 TSPAN11A1L157 253 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 TOR1BO14657 336 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 BUB1BO60566 1050 aaPredicted RBP17.5■□□□□ 0.39
IRF3-208ENST00000594387 MAFKO60675 156 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 ALPPL2P10696 532 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 CDK4P11802 303 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 KRT10P13645 584 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 MX2P20592 715 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 SLC1A1P43005 524 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 TAS2R40P59535 323 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 HNRNPKP61978 463 aaKnown RBP eCLIP17.5■□□□□ 0.39
IRF3-208ENST00000594387 YPEL5P62699 121 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 PDE1CQ14123 709 aaPredicted RBP17.5■□□□□ 0.39
IRF3-208ENST00000594387 IFI16Q16666 785 aaKnown RBP17.5■□□□□ 0.39
IRF3-208ENST00000594387 CCDC170Q8IYT3 715 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 NDUFAF2Q8N183 169 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 PNPLA1Q8N8W4 532 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 PDCD6IPQ8WUM4 868 aaKnown RBP17.5■□□□□ 0.39
IRF3-208ENST00000594387 MRFAP1L1Q96HT8 127 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 BMFQ96LC9 184 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 NUDCD1Q96RS6 583 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 PCDH12Q9NPG4 1184 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 EVA1BQ9NVM1 165 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 ATP8A1Q9Y2Q0 1164 aa17.5■□□□□ 0.39
IRF3-208ENST00000594387 LRRD1A4D1F6 860 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 POM121BA6NF01 834 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 ENC1O14682 589 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 RIOK3O14730 519 aaKnown RBP17.49■□□□□ 0.39
IRF3-208ENST00000594387 SDC3O75056 442 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 CD48P09326 243 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 ATXN1LP0C7T5 689 aaKnown RBP17.49■□□□□ 0.39
IRF3-208ENST00000594387 CES1P23141 567 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 KDELR1P24390 212 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 IL4RP24394 825 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 RGRP47804 291 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 FGL2Q14314 439 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 LRRC14Q15048 493 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 PAFAH1B3Q15102 231 aaKnown RBP17.49■□□□□ 0.39
IRF3-208ENST00000594387 SHBQ15464 509 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 RAB44Q7Z6P3 723 aaPredicted RBP17.49■□□□□ 0.39
IRF3-208ENST00000594387 PARGQ86W56 976 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 TP53INP2Q8IXH6 220 aa17.49■□□□□ 0.39
IRF3-208ENST00000594387 DDX56Q9NY93 547 aaKnown RBP17.49■□□□□ 0.39
IRF3-208ENST00000594387 CFAP69A5D8W1 941 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 RAD51BO15315 384 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 SPOPO43791 374 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 MTA2O94776 668 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 C1SP09871 688 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 TNNT1P13805 278 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 ITIH2P19823 946 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 SPINK2P20155 84 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 CCNCP24863 283 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 GARSP41250 739 aaKnown RBP17.48■□□□□ 0.39
IRF3-208ENST00000594387 ARSEP51690 589 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 ZNF75DP51815 510 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 SLCO6A1Q86UG4 719 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 RHOT1Q8IXI2 618 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 GALNT15Q8N3T1 639 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 TC2NQ8N9U0 490 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 CCNYQ8ND76 341 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 ATL2Q8NHH9 583 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 PCDH19Q8TAB3 1148 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 BTN2A2Q8WVV5 523 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 CENPTQ96BT3 561 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 KLF6Q99612 283 aaPredicted RBP17.48■□□□□ 0.39
IRF3-208ENST00000594387 RBSNQ9H1K0 784 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 NT5MQ9NPB1 228 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 MSRB2Q9Y3D2 182 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 NCOR2Q9Y618 2525 aa17.48■□□□□ 0.39
IRF3-208ENST00000594387 SPTY2D1-AS1A0A0U1RR47 76 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms