RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TSGA10Q9BZW7 698 aa14.7□□□□□ -0.06
VRK3-206ENST00000594090 SCUBE2Q9NQ36 999 aa14.7□□□□□ -0.06
VRK3-206ENST00000594090 ANKRD6Q9Y2G4 727 aa14.7□□□□□ -0.06
VRK3-206ENST00000594090 PCDHA3Q9Y5H8 950 aa14.7□□□□□ -0.06
VRK3-206ENST00000594090 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 A0A1W2PR77 199 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 PRAMEF26H0Y7S4 382 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 TRAFD1O14545 582 aaPredicted RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 PPP1R12AO14974 1030 aaPredicted RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 VILLO15195 856 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 SLC31A1O15431 190 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 CST8O60676 142 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 CCNB1P14635 433 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 ITIH2P19823 946 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 HNRNPA2B1P22626 353 aaKnown RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 XPAP23025 273 aaPredicted RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 SUOXP51687 545 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 CCZ1BP86790 482 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 CCZ1P86791 482 aaPredicted RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 FGL2Q14314 439 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 PPP2R5EQ16537 467 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 KIF19Q2TAC6 998 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 RALGPS1Q5JS13 557 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 ALG1LQ6GMV1 187 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 IL27RAQ6UWB1 636 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 SYCE1Q8N0S2 351 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 TMEM145Q8NBT3 493 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 MYOCQ99972 504 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 POLR1EQ9GZS1 481 aaKnown RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 NOD2Q9HC29 1040 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 FZD3Q9NPG1 666 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 PCDH12Q9NPG4 1184 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 DNAAF2Q9NVR5 837 aaKnown RBP14.69□□□□□ -0.06
VRK3-206ENST00000594090 RBM22Q9NW64 420 aaKnown RBP eCLIP14.69□□□□□ -0.06
VRK3-206ENST00000594090 AMACRQ9UHK6 382 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 SNX11Q9Y5W9 270 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 CAPN6Q9Y6Q1 641 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 DOCK9Q9BZ29 2069 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 TMEM131Q92545 1883 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 CACNA1EQ15878 2313 aa14.69□□□□□ -0.06
VRK3-206ENST00000594090 IGLON5A6NGN9 336 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 KCNK1O00180 336 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 TM4SF5O14894 197 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 HTRA2O43464 458 aaPredicted RBP14.68□□□□□ -0.06
VRK3-206ENST00000594090 SOCS5O75159 536 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 NEBLO76041 1014 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 CER1O95813 267 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 PECAM1P16284 738 aaPredicted RBP14.68□□□□□ -0.06
VRK3-206ENST00000594090 TGM2P21980 687 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 AKT2P31751 481 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 CTSKP43235 329 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 NR2C2P49116 596 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 C21orf59P57076 290 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 COPS2P61201 443 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 ADCY2Q08462 1091 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 AP1B1Q10567 949 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 PDK1Q15118 436 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 UAP1L1Q3KQV9 507 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 SLC45A4Q5BKX6 768 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 PEX26Q7Z412 305 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 CXorf40AQ8TE69 158 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 SKA1Q96BD8 255 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 SEMA3CQ99985 751 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 SLC17A9Q9BYT1 436 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 GAREM1Q9H706 876 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 HAUS2Q9NVX0 235 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 SAE1Q9UBE0 346 aaPredicted RBP14.68□□□□□ -0.06
VRK3-206ENST00000594090 AMFRQ9UKV5 643 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 CA5BQ9Y2D0 317 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 ATP8A1Q9Y2Q0 1164 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 TTLL3Q9Y4R7 772 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 PCDHGC4Q9Y5F7 938 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 TRPM6Q9BX84 2022 aa14.68□□□□□ -0.06
VRK3-206ENST00000594090 KRT86O43790 486 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 OPHN1O60890 802 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 FTCDO95954 541 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 HLA-DQB2P05538 268 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 PTPN7P35236 360 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 PEX5P50542 639 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 RWDD2BP57060 319 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 IFI35P80217 286 aaPredicted RBP14.67□□□□□ -0.06
VRK3-206ENST00000594090 ITKQ08881 620 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 ELP6Q0PNE2 266 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 TRAF2Q12933 501 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 ZBTB17Q13105 803 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 STAT4Q14765 748 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 HLA-BQ31612 363 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 TMEM52BQ4KMG9 183 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 ERAP2Q6P179 960 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 BZW1Q7L1Q6 419 aaKnown RBP14.67□□□□□ -0.06
VRK3-206ENST00000594090 RNF10Q8N5U6 811 aaKnown RBP14.67□□□□□ -0.06
VRK3-206ENST00000594090 PAF1Q8N7H5 531 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 MFSD2AQ8NA29 543 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 ALG3Q92685 438 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 WRAP53Q9BUR4 548 aaKnown RBP14.67□□□□□ -0.06
VRK3-206ENST00000594090 C1QTNF2Q9BXJ5 285 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 BRD8Q9H0E9 1235 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 IL21RQ9HBE5 538 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 PACSIN2Q9UNF0 486 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms