RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TSHRP16473 764 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 DESP17661 470 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 SUOXP51687 545 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 SPIDRQ14159 915 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 CLEC16AQ2KHT3 1053 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 PARP15Q460N3 678 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 CDKAL1Q5VV42 579 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 DNAJC24Q6P3W2 148 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 TP53I13Q8NBR0 393 aaPredicted RBP22.9■■□□□ 1.26
SSBP4-203ENST00000593641 NETO2Q8NC67 525 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 SCG3Q8WXD2 468 aaKnown RBP22.9■■□□□ 1.26
SSBP4-203ENST00000593641 CCDC97Q96F63 343 aaPredicted RBP22.9■■□□□ 1.26
SSBP4-203ENST00000593641 HMCESQ96FZ2 354 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 SLC46A1Q96NT5 459 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 PCDHB18PQ96TA0 734 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 MBNL1Q9NR56 388 aaKnown RBP22.9■■□□□ 1.26
SSBP4-203ENST00000593641 PNMA8BQ9ULN7 279 aaPredicted RBP22.9■■□□□ 1.26
SSBP4-203ENST00000593641 UNC13CQ8NB66 2214 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 FLNBO75369 2602 aaKnown RBP22.9■■□□□ 1.26
SSBP4-203ENST00000593641 LRP4O75096 1905 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 SIGLEC16A6NMB1 481 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 RASA4BC9J798 803 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 CCP110O43303 1012 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 RASA4O43374 803 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 TIMP2P16035 220 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 ITIH2P19823 946 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 CFHR1Q03591 330 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 LRRC14Q15048 493 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 IRF4Q15306 451 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 ELOCQ15369 112 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 CFAP58Q5T655 872 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 FOXR1Q6PIV2 292 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 ZNF605Q86T29 641 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 ZNF843Q8N446 348 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 FSTL5Q8N475 847 aaPredicted RBP22.89■■□□□ 1.25
SSBP4-203ENST00000593641 ARL14Q8N4G2 192 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 WDR36Q8NI36 951 aaKnown RBP22.89■■□□□ 1.25
SSBP4-203ENST00000593641 EXOC2Q96KP1 924 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 CCDC3Q9BQI4 270 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 CPEB1Q9BZB8 566 aaKnown RBP22.89■■□□□ 1.25
SSBP4-203ENST00000593641 KLC2Q9H0B6 622 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 PADI4Q9UM07 663 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 AHCTF1Q8WYP5 2266 aa22.89■■□□□ 1.25
SSBP4-203ENST00000593641 TMEM110-MUSTN1A8MSY1 372 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 YY2O15391 372 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 FGF10O15520 208 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-203ENST00000593641 PIGNO95427 931 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 ALPIP09923 528 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 CTSEP14091 401 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 HTR1BP28222 390 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 PEX5P50542 639 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 ZNF143P52747 638 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-203ENST00000593641 AIF1P55008 147 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 SERINC3Q13530 473 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 GRM3Q14832 879 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 TMEM52BQ4KMG9 183 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 DNAAF5Q86Y56 855 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 ARL10Q8N8L6 244 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 ANKRD20A12PQ8NF67 263 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 NEK11Q8NG66 645 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 MCEEQ96PE7 176 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 CLPBQ9H078 707 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 DONSONQ9NYP3 566 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 GULP1Q9UBP9 304 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 UBA2Q9UBT2 640 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-203ENST00000593641 SIK3Q9Y2K2 1263 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 COQ6Q9Y2Z9 468 aa22.88■■□□□ 1.25
SSBP4-203ENST00000593641 A0A1W2PNU3 283 aaPredicted RBP22.87■■□□□ 1.25
SSBP4-203ENST00000593641 WASH4PA8MWX3 477 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 INSIG1O15503 277 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 HK3P52790 923 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 C1QBPQ07021 282 aaKnown RBP22.87■■□□□ 1.25
SSBP4-203ENST00000593641 VAC14Q08AM6 782 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 ERAP2Q6P179 960 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 PCSK4Q6UW60 755 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 MON1BQ7L1V2 547 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 HID1Q8IV36 788 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 UMODL1-AS1Q8N2C9 162 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 ATL2Q8NHH9 583 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 HCAR2Q8TDS4 363 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 WBP1Q96G27 269 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 LHX3Q9UBR4 397 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 FZD10Q9ULW2 581 aa22.87■■□□□ 1.25
SSBP4-203ENST00000593641 CCDC187A0A096LP49 1063 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 RASGRP1O95267 797 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 C6P13671 934 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 MLLT3P42568 568 aaPredicted RBP22.86■■□□□ 1.25
SSBP4-203ENST00000593641 UGP2Q16851 508 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 LVRNQ6Q4G3 990 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 ENPP7Q6UWV6 458 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 PCDH19Q8TAB3 1148 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 PRR11Q96HE9 360 aaPredicted RBP22.86■■□□□ 1.25
SSBP4-203ENST00000593641 EDEM3Q9BZQ6 932 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 SUV39H2Q9H5I1 410 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 SIRPGQ9P1W8 387 aa22.86■■□□□ 1.25
SSBP4-203ENST00000593641 CDRT15L2A8MXV6 281 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 CELA2BP08218 269 aaPredicted RBP22.85■■□□□ 1.25
SSBP4-203ENST00000593641 PLA2G2AP14555 144 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 COPB1P53618 953 aaKnown RBP22.85■■□□□ 1.25
SSBP4-203ENST00000593641 TPI1P60174 286 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms